RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 IL1AP01583 271 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 MGMTP16455 207 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 SRMP19623 302 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 NFYBP25208 207 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 CHATP28329 748 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 GNG10P50151 68 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 DYNLT3P51808 116 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 LGALS4P56470 323 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 TMEM50BP56557 158 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 CLDN12P56749 244 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 OR10A3P58181 314 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 TAS2R43P59537 309 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 RPL15P61313 204 aaKnown RBP4.04□□□□□ -1.76
USH1C-210ENST00000534556 PPP3R1P63098 170 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 EMX1Q04741 257 aaPredicted RBP4.04□□□□□ -1.76
USH1C-210ENST00000534556 GNMTQ14749 295 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 P2RY14Q15391 338 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 MPV17LQ2QL34 196 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 HLA-DRB5Q30154 266 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 TCTEX1D4Q5JR98 221 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 ATAD3CQ5T2N8 411 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 TPTE2P1Q5T6R2 138 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 MINOS1Q5TGZ0 78 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 AWAT2Q6E213 333 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 RAB12Q6IQ22 244 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 GDPGP1Q6ZNW5 385 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 CDH26Q8IXH8 852 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 LYG1Q8N1E2 194 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 Q8N2B8 174 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 OR5R1Q8NH85 324 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 ZNF596Q8TC21 504 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 MRPL30Q8TCC3 161 aaKnown RBP4.04□□□□□ -1.76
USH1C-210ENST00000534556 MYDGFQ969H8 173 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 ST6GALNAC6Q969X2 333 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 MYCBPQ99417 103 aaPredicted RBP4.04□□□□□ -1.76
USH1C-210ENST00000534556 MGLLQ99685 303 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 HDHD3Q9BSH5 251 aaPredicted RBP4.04□□□□□ -1.76
USH1C-210ENST00000534556 SELENOIQ9C0D9 397 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 WNT10AQ9GZT5 417 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 PARP12Q9H0J9 701 aaKnown RBP4.04□□□□□ -1.76
USH1C-210ENST00000534556 LPAR5Q9H1C0 372 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 NCOR1P1Q9H4R4 102 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 ISYNA1Q9NPH2 558 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 ACOT13Q9NPJ3 140 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 CHCHD3Q9NX63 227 aaKnown RBP4.04□□□□□ -1.76
USH1C-210ENST00000534556 DPM3Q9P2X0 92 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 GLS2Q9UI32 602 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 ERGIC3Q9Y282 383 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 MINOS1-NBL1R4GNA1 71 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 IGHV3-72A0A0B4J1Y9 119 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 hCG_1809904A0A1W2PP81 198 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 A0A1W2PPE2 198 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 A0A1W2PPH5 198 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 A0A1W2PR64 198 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 A0A1W2PRV1 198 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 SMIM30A4D0T7 59 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 F2RL2O00254 374 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 TIMM23O14925 209 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 MAGEB3O15480 346 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 DENRO43583 198 aaKnown RBP4.03□□□□□ -1.76
USH1C-210ENST00000534556 PROP1O75360 226 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 CRTAPO75718 401 aaPredicted RBP4.03□□□□□ -1.76
USH1C-210ENST00000534556 MPIG6BO95866 241 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 HBZP02008 142 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 CSTBP04080 98 aaKnown RBP4.03□□□□□ -1.76
USH1C-210ENST00000534556 CRYBA1P05813 215 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 HSMCR30P0CW71 290 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 CD28P10747 220 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 GTF2F2P13984 249 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 HTR1DP28221 377 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 RPS27AP62979 156 aaKnown RBP4.03□□□□□ -1.76
USH1C-210ENST00000534556 MLLT11Q13015 90 aaPredicted RBP4.03□□□□□ -1.76
USH1C-210ENST00000534556 MED21Q13503 144 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 GPR50Q13585 617 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 TBCEQ15813 527 aaPredicted RBP4.03□□□□□ -1.76
USH1C-210ENST00000534556 MOGAT2Q3SYC2 334 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 HSD17B12Q53GQ0 312 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 CT45A1Q5HYN5 189 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 RBM48Q5RL73 367 aaKnown RBP4.03□□□□□ -1.76
USH1C-210ENST00000534556 SYT6Q5T7P8 510 aaPredicted RBP4.03□□□□□ -1.76
USH1C-210ENST00000534556 ZNF880Q6PDB4 577 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 CD200R1LQ6Q8B3 271 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 TREML4Q6UXN2 200 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 C6orf201Q7Z4U5 140 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 ODF3L1Q8IXM7 274 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 SPARTQ8N0X7 666 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 MS4A15Q8N5U1 240 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 DRAM1Q8N682 238 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 KLHDC1Q8N7A1 406 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 OR52L2PQ8NGH6 319 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 CT45A3Q8NHU0 189 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 SGMS2Q8NHU3 365 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 NDNFQ8TB73 568 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 PHYHIPQ92561 330 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 ARL11Q969Q4 196 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 RITA1Q96K30 269 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 UQCC2Q9BRT2 126 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 FAAP24Q9BTP7 215 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 TM2D1Q9BX74 207 aa4.03□□□□□ -1.76
USH1C-210ENST00000534556 CCDC90BQ9GZT6 254 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms