RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	OR10G9	Q8NGN4	311 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	OR10G7	Q8NGN6	311 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	P2RX4	Q99571	388 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	COL4A1	P02462	1669 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TRAV39	A0A0B4J263	110 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532		A0A1W2PPQ1	181 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	WISP3	O95389	354 aa	Predicted RBP	13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MMP7	P09237	267 aa	Predicted RBP	13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GNG4	P50150	75 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	IL11	P20809	199 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RPS4Y1	P22090	263 aa	Known RBP	13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RBM11	P57052	281 aa	Known RBP	13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RPS4X	P62701	263 aa	Known RBP	13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ZDHHC11	Q9H8X9	412 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ZNF586	Q9NXT0	402 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	VSIG4	Q9Y279	399 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	FOXH1	O75593	365 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RAB5A	P20339	215 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MPV17	P39210	176 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SIGLECL1	Q8N7X8	197 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SNX22	Q96L94	193 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PARP11	Q9NR21	331 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PF4V1	P10720	104 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RPL30	P62888	115 aa	Known RBP	13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TIMP4	Q99727	224 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	NPAS1	Q99742	590 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PRSS23	O95084	383 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TIAF1	O95411	115 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SMIM10L1	P0DMW3	83 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MYPOP	Q86VE0	399 aa	Predicted RBP	13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SMIM10	Q96HG1	83 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ZNF488	Q96MN9	340 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	NKX6-2	Q9C056	277 aa	Predicted RBP	13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RP1	P56715	2156 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ANKRD20A5P	A0PJZ0	165 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ADAM10	O14672	748 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PPP1CC	P36873	323 aa	Known RBP	13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ADAT3	Q96EY9	351 aa	Predicted RBP	13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	KCNK15	Q9H427	330 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GP6	Q9HCN6	339 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SLC25A47	Q6Q0C1	308 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	WFDC3	Q8IUB2	231 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	LINC01560	Q8TB33	94 aa		13.67	□□□□□ -0.22
NCAPD3-213	ENST00000534532	WDR90	Q96KV7	1748 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	LEUTX	A8MZ59	168 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TTR	P02766	147 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	HTN1	P15515	57 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	HOXA6	P31267	233 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SLIRP	Q9GZT3	109 aa	Known RBP	13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532		A0A1W2PNV4	684 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TXNDC12	O95881	172 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	VSIG8	P0DPA2	414 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	POLR2G	P62487	172 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532		A0A1W2PPE3	182 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	COX5B	P10606	129 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PERP	Q96FX8	193 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ZNF107	Q9UII5	783 aa	Predicted RBP	13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GVINP1	Q7Z2Y8	2422 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532		J3QR06	171 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	CDK2AP1	O14519	115 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GATC	O43716	136 aa	Known RBP	13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MGAT2	Q10469	447 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	XAF1	Q6GPH4	301 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PRSS54	Q6PEW0	395 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PGLYRP3	Q96LB9	341 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	LINC00052	Q96N35	136 aa		13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ZNF552	Q9H707	407 aa	Predicted RBP	13.66	□□□□□ -0.22
NCAPD3-213	ENST00000534532	HIST1H1E	P10412	219 aa	Known RBP	13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SLC6A1	P30531	599 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	AMT	P48728	403 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GZMK	P49863	264 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RAX	Q9Y2V3	346 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	HLA-G	P17693	338 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	NSUN5P2	Q63ZY6	315 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MMP24	Q9Y5R2	645 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	LRRC37A	A6NMS7	1700 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PPIAL4C	A0A0B4J2A2	164 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	INHBB	P09529	407 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PPIAL4G	P0DN37	164 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RPL27A	P46776	148 aa	Known RBP	13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	STXBP6	Q8NFX7	210 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	STARD4	Q96DR4	205 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	LOC105371242	A0A075B767	164 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TMEM229A	B2RXF0	380 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SMAD7	O15105	426 aa	Known RBP	13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	FGF12	P61328	243 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	CALHM1	Q8IU99	346 aa		13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	NUP214	P35658	2090 aa	Predicted RBP	13.65	□□□□□ -0.22
NCAPD3-213	ENST00000534532	IGHV1-69-2	A0A0G2JMI3	117 aa		13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	RNASEK-C17orf49	H0YIS7	233 aa		13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	NPY1R	P25929	384 aa		13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	GALR1	P47211	349 aa		13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	MVD	P53602	400 aa		13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	IGLV3-21	P80748	117 aa	Predicted RBP	13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	GUCA2B	Q16661	112 aa		13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	CLEC12B	Q2HXU8	276 aa		13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	KCNK17	Q96T54	332 aa		13.65	□□□□□ -0.23
NCAPD3-213	ENST00000534532	PRSS27	Q9BQR3	290 aa		13.65	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms