RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ZBTB25P24278 435 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 PSMB9P28065 219 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OPRD1P41143 372 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 RAB7AP51149 207 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 BIDP55957 195 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OR4D2P58180 307 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OR10A3P58181 314 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 KRTAP10-9P60411 292 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 STXBP1P61764 594 aaKnown RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 LSM3P62310 102 aaKnown RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 UBA52P62987 128 aaKnown RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 PAX2Q02962 417 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 SRSF6Q13247 344 aaKnown RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 LAGE3Q14657 143 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 HERPUD1Q15011 391 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 MAPK14Q16539 360 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 RPEL1Q2QD12 228 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 PLPPR5Q32ZL2 321 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 MS4A13Q5J8X5 152 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 FAM120AOSQ5T036 256 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 DCST2Q5T1A1 773 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 FAM45BPQ6NSW5 357 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM205Q6UW68 189 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TRAPPC5Q8IUR0 188 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 PRELID2Q8N945 189 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 CDRT4Q8N9R6 151 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF555Q8NEP9 628 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OR10AD1Q8NGE0 317 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OR4P4Q8NGL7 312 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 FAM45AQ8TCE6 357 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 BAALCQ8WXS3 180 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 NEIL2Q969S2 332 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM159Q96B96 161 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 REEP6Q96HR9 211 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TEX37Q96LM6 180 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 FAAP24Q9BTP7 215 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 CST9LQ9H4G1 147 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 THAP10Q9P2Z0 257 aaPredicted RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 VPS29Q9UBQ0 182 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 PRODH2Q9UF12 536 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF230Q9UIE0 474 aaPredicted RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 LSM7Q9UK45 103 aaKnown RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 RARRES3Q9UL19 164 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 YARS2Q9Y2Z4 477 aaKnown RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TPRP12270 2363 aaKnown RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 COL1A2P08123 1366 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 TRAV30A0A087WSZ9 112 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 A0A0G2JN53 185 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 KIR2DL5BA0A0G2JN68 375 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 KIR2DL5BA0A0G2JPC4 375 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 HSD17B6O14756 317 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 EIF4E2O60573 245 aaKnown RBP2.81□□□□□ -1.96
CSMD3-210ENST00000534172 MMP23AO75900 390 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 HPRT1P00492 218 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 IGHV3-9P01782 118 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 KLK1P06870 262 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 H2AFZP0C0S5 128 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 SULT1A3P0DMM9 295 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 SULT1A4P0DMN0 295 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 AK4P27144 223 aaPredicted RBP2.81□□□□□ -1.96
CSMD3-210ENST00000534172 IL2RGP31785 369 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 RANP62826 216 aaKnown RBP2.81□□□□□ -1.96
CSMD3-210ENST00000534172 ST3GAL3Q11203 375 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF146Q15072 292 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 NSDHLQ15738 373 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 SYPL2Q5VXT5 272 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 GDPGP1Q6ZNW5 385 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 TMPPEQ6ZT21 453 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 ACOT7LQ6ZUV0 252 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 TMUB2Q71RG4 321 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 H2AFVQ71UI9 128 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 APOBEC3FQ8IUX4 373 aaKnown RBP2.81□□□□□ -1.96
CSMD3-210ENST00000534172 KIR2DL5AQ8N109 375 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 OR2T33Q8NG76 320 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 OR13C4Q8NGS5 318 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 LGALS14Q8TCE9 139 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 ITCHQ96J02 903 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 OR7D2Q96RA2 312 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 CHRNA10Q9GZZ6 450 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 PARLQ9H300 379 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 BOLA2Q9H3K6 86 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 NOX3Q9HBY0 568 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 NTNG1Q9Y2I2 539 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 V9GYY9 64 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 NCOR2Q9Y618 2525 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 MTCL1Q9Y4B5 1905 aaKnown RBP2.81□□□□□ -1.96
CSMD3-210ENST00000534172 TECTAO75443 2155 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 TRAV8-7A0A075B6U6 113 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 TEX48A0A1B0GUV7 120 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 HMSDA8MTL9 139 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 LYRM1O43325 122 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 SIX6O95475 246 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 ACTL6AO96019 429 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 CST2P09228 141 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 PET100P0DJ07 73 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 KDELR2P33947 212 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 CSRP3P50461 194 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 NDUFV3P56181 108 aaKnown RBP2.81□□□□□ -1.96
CSMD3-210ENST00000534172 CKS1BP61024 79 aa2.81□□□□□ -1.96
CSMD3-210ENST00000534172 SRPXP78539 464 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms