RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 GNAO1P09471 354 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 PF4V1P10720 104 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 CELP19835 753 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 BEAN1Q3B7T3 259 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 FBLN7Q53RD9 439 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 GLIPR1L1Q6UWM5 242 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 AHSA2Q719I0 299 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 OR8H3Q8N146 312 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 DRAM1Q8N682 238 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 ZNF485Q8NCK3 441 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 BPIFB6Q8NFQ5 453 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 OR4X2Q8NGF9 303 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 MUL1Q969V5 352 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 VCXQ9H320 206 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 SPACA1Q9HBV2 294 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 PSORS1C1Q9UIG5 152 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 A0A1W2PPE3 182 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 MAGEA13PA6NCF6 341 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A9PA6NNJ1 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 AMY1AP04745 511 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 AMY2AP04746 511 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 TMEM11P17152 192 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 FSTP19883 344 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 WNT4P56705 351 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 HNF4GQ14541 408 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 OXLD1Q5BKU9 147 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 OGFRL1Q5TC84 451 aaPredicted RBP12.3□□□□□ -0.44
CPSF1-211ENST00000533492 AWAT2Q6E213 333 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 CDH26Q8IXH8 852 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 MRPS24Q96EL2 167 aaKnown RBP12.3□□□□□ -0.44
CPSF1-211ENST00000533492 PLCXD1Q9NUJ7 323 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 ERGIC3Q9Y282 383 aa12.3□□□□□ -0.44
CPSF1-211ENST00000533492 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
CPSF1-211ENST00000533492 A0A1W2PPI3 338 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 AIPO00170 330 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
CPSF1-211ENST00000533492 ORC5O43913 435 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 MT-ND4P03905 459 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 GAPDHP04406 335 aaKnown RBP12.29□□□□□ -0.44
CPSF1-211ENST00000533492 CD33P20138 364 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 DOC2BQ14184 412 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 DIAPH2-AS1Q14236 149 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 KHDC1LQ5JSQ8 128 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 KPRPQ5T749 579 aaPredicted RBP12.29□□□□□ -0.44
CPSF1-211ENST00000533492 LAIR2Q6ISS4 152 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 MOB3BQ86TA1 216 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 OR52M1Q8NGK5 317 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 UBALD1Q8TB05 177 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 THRSPQ92748 146 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 DERL3Q96Q80 235 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 RAB9BQ9NP90 201 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
CPSF1-211ENST00000533492 C15orf65H3BRN8 121 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 CCRL2O00421 344 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 HSD17B6O14756 317 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 CASQ2O14958 399 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-211ENST00000533492 IGKV1D-33P01593 117 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 IGKV1-33P01594 117 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 CD1AP06126 327 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 IL3RAP26951 378 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 MAPK3P27361 379 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-211ENST00000533492 RAB12Q6IQ22 244 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 ZNF497Q6ZNH5 498 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 NANOGP1Q8N7R0 232 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 SGCDQ92629 289 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 MYDGFQ969H8 173 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 SELENOIQ9C0D9 397 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 BANF2Q9H503 90 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 GFOD1Q9NXC2 390 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 ETAA1Q9NY74 926 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 PEX16Q9Y5Y5 336 aa12.28□□□□□ -0.44
CPSF1-211ENST00000533492 IGHV3-43A0A0B4J1X8 118 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 PSMB11A5LHX3 300 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 SPINT2O43291 252 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 CRTAPO75718 401 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-211ENST00000533492 PF4P02776 101 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 PRB2P02812 416 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-211ENST00000533492 IGHV3-43DP0DP04 118 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 REG1BP48304 166 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 ZNF816Q0VGE8 651 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-211ENST00000533492 TCTEX1D4Q5JR98 221 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 C6orf183Q5T699 404 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 SYT6Q5T7P8 510 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-211ENST00000533492 REC114Q7Z4M0 266 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 LINC00311Q8N616 119 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 NKAIN3Q8N8D7 197 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 FBLIM1Q8WUP2 373 aa12.27□□□□□ -0.45
CPSF1-211ENST00000533492 RCC2Q9P258 522 aaKnown RBP12.27□□□□□ -0.45
CPSF1-211ENST00000533492 IGHV1-3A0A0C4DH29 117 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 FAM90A10PA6NDY2 464 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms