RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZNF626Q68DY1 528 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 OR52W1Q6IF63 320 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 RBMS3Q6XE24 437 aaKnown RBP9.75□□□□□ -0.85
SSBP3-214ENST00000533209 SLC16A12Q6ZSM3 486 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 OR56B1Q8NGI3 324 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 OR4K15Q8NH41 348 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 RFESDQ8TAC1 157 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 MRPL30Q8TCC3 161 aaKnown RBP9.75□□□□□ -0.85
SSBP3-214ENST00000533209 C17orf50Q8WW18 174 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 PTX4Q96A99 478 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 KIRREL1Q96J84 757 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 JMJD8Q96S16 334 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 NAA50Q9GZZ1 169 aaKnown RBP9.75□□□□□ -0.85
SSBP3-214ENST00000533209 TMEM133Q9H2Q1 129 aa9.75□□□□□ -0.85
SSBP3-214ENST00000533209 KIAA2026Q5HYC2 2103 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 A0A087X0M5 115 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 A0A1B0GX30 115 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 DNAJC9-AS1A6NH13 148 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 C15orf65H3BRN8 121 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 PAHP00439 452 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 MELTFP08582 738 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 GZMHP20718 246 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 CD34P28906 385 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 RPS19P39019 145 aaKnown RBP9.74□□□□□ -0.85
SSBP3-214ENST00000533209 VBP1P61758 197 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 BAMBIQ13145 260 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 MOGAT2Q3SYC2 334 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 PLAC9Q5JTB6 97 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 LDLRAD2Q5SZI1 272 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 Q6YL49 198 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 LHFPL4Q7Z7J7 247 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 ANKRD13BQ86YJ7 626 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 ABHD12Q8N2K0 398 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 ZDHHC16Q969W1 377 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 ARHGAP5-AS1Q96IT6 56 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 PECRQ9BY49 303 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 ZNF286AQ9HBT8 521 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 PLEKHJ1Q9NW61 149 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 IDI2-AS1Q9NZ38 188 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 TRAPPC2LQ9UL33 140 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 HSF4Q9ULV5 492 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 FAM96BQ9Y3D0 163 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 COL6A5A8TX70 2615 aa9.74□□□□□ -0.85
SSBP3-214ENST00000533209 FAM172BPA6NC97 362 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 C12orf77C9JDV5 145 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 RAB27BO00194 218 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 HOXA3O43365 443 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-214ENST00000533209 ORC5O43913 435 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 GABARAPO95166 117 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 NAPSAO96009 420 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 ARG1P05089 322 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 FBP1P09467 338 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 RCC1P18754 421 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-214ENST00000533209 NFYBP25208 207 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 LGALS4P56470 323 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 NCS1P62166 190 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 UBA52P62987 128 aaKnown RBP9.73□□□□□ -0.85
SSBP3-214ENST00000533209 DYNC1I2Q13409 638 aaKnown RBP9.73□□□□□ -0.85
SSBP3-214ENST00000533209 SLC9A3R2Q15599 337 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 CTF1Q16619 201 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 KRTAP24-1Q3LI83 254 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 C6orf183Q5T699 404 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 IDNKQ5T6J7 187 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 GPR107Q5VW38 600 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 Q6ZPA2 131 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 Q6ZTK2 550 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 GPR141Q7Z602 305 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 LDLRAD3Q86YD5 345 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 OR10R2Q8NGX6 335 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 UBALD1Q8TB05 177 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 LGALS14Q8TCE9 139 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 ARL11Q969Q4 196 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 DUX5Q96PT3 197 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 CLEC7AQ9BXN2 247 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 MBNL3Q9NUK0 354 aaKnown RBP9.73□□□□□ -0.85
SSBP3-214ENST00000533209 ZNRD1Q9P1U0 126 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 KCNK7Q9Y2U2 307 aa9.73□□□□□ -0.85
SSBP3-214ENST00000533209 CLDN34H7C241 214 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 F2RL2O00254 374 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 IGLV1-47P01700 117 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 SCAND1P57086 179 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 FAM189A2Q15884 450 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 LTC4SQ16873 150 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 ZNF880Q6PDB4 577 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 C5orf24Q7Z6I8 188 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 CROCCP3Q8IVE0 287 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 DYNAPQ8N1N2 210 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 BEND2Q8NDZ0 799 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 OR4P4Q8NGL7 312 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 OR5H6Q8NGV6 325 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 RAB3CQ96E17 227 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 MDFIQ99750 246 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 HDHD3Q9BSH5 251 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-214ENST00000533209 ATG5Q9H1Y0 275 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 AK3Q9UIJ7 227 aa9.72□□□□□ -0.85
SSBP3-214ENST00000533209 TBL2Q9Y4P3 447 aaKnown RBP9.72□□□□□ -0.85
SSBP3-214ENST00000533209 TRBV6-6A0A0A6YYG2 114 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 METTL21EPA6NDL7 271 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 TRIM77I1YAP6 450 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms