RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ZNF281Q9Y2X9 895 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 NCBP2LA6PVI3 153 aaKnown RBP14.11□□□□□ -0.15
PCF11-206ENST00000533018 NUDT19A8MXV4 375 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 SDCBPO00560 298 aaPredicted RBP14.11□□□□□ -0.15
PCF11-206ENST00000533018 WBP4O75554 376 aaKnown RBP14.11□□□□□ -0.15
PCF11-206ENST00000533018 GAPDHP04406 335 aaKnown RBP14.11□□□□□ -0.15
PCF11-206ENST00000533018 SLC35B1P78383 322 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 PAX5Q02548 391 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 RIPK1Q13546 671 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 SLC22A6Q4U2R8 563 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 OR13C5Q8NGS8 318 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 DPF1Q92782 380 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 ZNF184Q99676 751 aaPredicted RBP14.11□□□□□ -0.15
PCF11-206ENST00000533018 CHCHD3Q9NX63 227 aaKnown RBP14.11□□□□□ -0.15
PCF11-206ENST00000533018 SMPD3Q9NY59 655 aaPredicted RBP14.11□□□□□ -0.15
PCF11-206ENST00000533018 IL36GQ9NZH8 169 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 CKLFQ9UBR5 152 aa14.11□□□□□ -0.15
PCF11-206ENST00000533018 SIRT4Q9Y6E7 314 aaPredicted RBP14.11□□□□□ -0.15
PCF11-206ENST00000533018 IGHV3-72A0A0B4J1Y9 119 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 IRGMA1A4Y4 181 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 FGF16O43320 207 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 ZNF780AO75290 641 aaPredicted RBP14.1□□□□□ -0.15
PCF11-206ENST00000533018 GTF2F2P13984 249 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 HOXD3P31249 432 aaPredicted RBP14.1□□□□□ -0.15
PCF11-206ENST00000533018 RPL23AP62750 156 aaKnown RBP14.1□□□□□ -0.15
PCF11-206ENST00000533018 NHLRC3Q5JS37 347 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 SLC35E3Q7Z769 313 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 LINC00596Q86U02 117 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 FOXRED2Q8IWF2 684 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 STX19Q8N4C7 294 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 SMIM19Q96E16 107 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 IFT22Q9H7X7 185 aa14.1□□□□□ -0.15
PCF11-206ENST00000533018 EXOSC1Q9Y3B2 195 aaKnown RBP14.1□□□□□ -0.15
PCF11-206ENST00000533018 IGHV3-43A0A0B4J1X8 118 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 IGHV1-3A0A0C4DH29 117 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 A0A1W2PP11 408 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 K7EIL1 84 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 IGHV3-43DP0DP04 118 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 KRTAP10-11P60412 298 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 MED21Q13503 144 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 MPV17LQ2QL34 196 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 MRPL41Q8IXM3 137 aaKnown RBP14.09□□□□□ -0.15
PCF11-206ENST00000533018 LINC00482Q8N8I6 264 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 KLHL30-AS1Q8NEE0 82 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 CYGBQ8WWM9 190 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 GHSRQ92847 366 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 COL7A1Q02388 2944 aa14.09□□□□□ -0.15
PCF11-206ENST00000533018 AIPO00170 330 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 OGG1O15527 345 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 IL3RAP26951 378 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 ZNF816Q0VGE8 651 aaPredicted RBP14.08□□□□□ -0.16
PCF11-206ENST00000533018 LRRC36Q1X8D7 754 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 C8orf86Q6ZUL3 223 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 OR2W3Q7Z3T1 314 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 PRR18Q8N4B5 295 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 JAGN1Q8N5M9 183 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 ZFP41Q8N8Y5 198 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 TMEM80Q96HE8 168 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 RDH12Q96NR8 316 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 GPR61Q9BZJ8 451 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 CLEC2DQ9UHP7 191 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 TRAPPC2LQ9UL33 140 aa14.08□□□□□ -0.16
PCF11-206ENST00000533018 DIMT1Q9UNQ2 313 aaKnown RBP14.08□□□□□ -0.16
PCF11-206ENST00000533018 A0A1W2PPK0 400 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 WI2-2373I1.2A0A1W2PRP0 233 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 LALBAP00709 142 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 THBS3P49746 956 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 GPR176Q14439 515 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 Q499Y3 187 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 FAM53AQ6NSI3 398 aaPredicted RBP14.07□□□□□ -0.16
PCF11-206ENST00000533018 C18orf65Q6ZTR6 163 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 STPG2Q8N412 459 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 OR52M1Q8NGK5 317 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 OR2T10Q8NGZ9 312 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 MUL1Q969V5 352 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 EAF1Q96JC9 268 aaPredicted RBP14.07□□□□□ -0.16
PCF11-206ENST00000533018 ZFP57Q9NU63 452 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 GFOD1Q9NXC2 390 aa14.07□□□□□ -0.16
PCF11-206ENST00000533018 PNMA8CA0A1B0GUJ8 204 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 MAGEA13PA6NCF6 341 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 LINC01548A6NM66 108 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 MCRIP1C9JLW8 97 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 C15orf65H3BRN8 121 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 EBAG9O00559 213 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 ORC5O43913 435 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 IGHG2P01859 326 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 MT-ND4P03905 459 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 IGFBP3P17936 291 aaPredicted RBP14.06□□□□□ -0.16
PCF11-206ENST00000533018 RAB25P57735 213 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 YIF1BQ5BJH7 314 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 SYT6Q5T7P8 510 aaPredicted RBP14.06□□□□□ -0.16
PCF11-206ENST00000533018 GLIPR1L1Q6UWM5 242 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 ETV3LQ6ZN32 361 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 ZNF497Q6ZNH5 498 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 COMMD1Q8N668 190 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 RTN4IP1Q8WWV3 396 aaPredicted RBP14.06□□□□□ -0.16
PCF11-206ENST00000533018 SPACA1Q9HBV2 294 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 ETAA1Q9NY74 926 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 GNG12Q9UBI6 72 aa14.06□□□□□ -0.16
PCF11-206ENST00000533018 MRPS28Q9Y2Q9 187 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 329.8 ms