RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 CXCL12P48061 93 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 FGF12P61328 243 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 CCL7P80098 99 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 SPEM2Q0P670 501 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 IL11RAQ14626 422 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 ICAM4Q14773 271 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 ELOBQ15370 118 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 CLDND2Q8NHS1 167 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 ANAPC16Q96DE5 110 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 MANBALQ9NQG1 85 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.12□□□□□ -1.11
BDNF-216ENST00000532997 MDFIC2A0A1B0GVS7 189 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 A0A1W2PPQ1 181 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 XKRY2A2RUG3 117 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 CCKARP32238 428 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 RIPPLY2Q5TAB7 128 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 ZNF343Q6P1L6 599 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 OR10P1Q8NGE3 313 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 ADGRG7Q96K78 797 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 LHX6Q9UPM6 363 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 PPP1R3CQ9UQK1 317 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 ATP23Q9Y6H3 246 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 PTPRSQ13332 1948 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 C5orf49A4QMS7 147 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 MT-CO2P00403 227 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 PDGFBP01127 241 aaPredicted RBP8.12□□□□□ -1.11
BDNF-216ENST00000532997 PATE4P0C8F1 98 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 CCL3P10147 92 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 OTX1P32242 354 aaPredicted RBP8.12□□□□□ -1.11
BDNF-216ENST00000532997 GNG3P63215 75 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 PSG4Q00888 419 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 SRYQ05066 204 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 NECAP1Q8NC96 275 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 SMRP1Q8NCR6 262 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 ASXL3Q9C0F0 2248 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 POLDIP2Q9Y2S7 368 aa8.12□□□□□ -1.11
BDNF-216ENST00000532997 UBE2L5PA0A1B0GUS4 154 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 EPOPA6NHQ4 379 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 OR5B21A6NL26 309 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 FOXI3A8MTJ6 420 aaPredicted RBP8.11□□□□□ -1.11
BDNF-216ENST00000532997 A8MXE2 369 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 SYNGR3O43761 229 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 IGHV2-70P01814 119 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 CEACAM1P13688 526 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 BCL3P20749 454 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 PRSS12P56730 875 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 ZNF92Q03936 586 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 FOXL2NBQ6ZUU3 175 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 ZNF784Q8NCA9 323 aaPredicted RBP8.11□□□□□ -1.11
BDNF-216ENST00000532997 ZNF845Q96IR2 970 aaPredicted RBP8.11□□□□□ -1.11
BDNF-216ENST00000532997 RTL8AQ9BWD3 113 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 SEMA5BQ9P283 1151 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 THADAQ6YHU6 1953 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 WDR1O75083 606 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 SLC25A6P12236 298 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HOXC12P31275 282 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H3AP68431 136 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 C9orf135Q5VTT2 229 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 SSC4DQ8WTU2 575 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 SPSB2Q99619 263 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 GPR35Q9HC97 309 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 KCNIP2Q9NS61 270 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 TMEM242Q9NWH2 141 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 TRAV1-1A0A0B4J248 108 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 hCG_38984A0A1B0GV85 526 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 DVL1O14640 695 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BKO60814 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BJP06899 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BOP23527 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BBP33778 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 FGF8P55075 233 aaPredicted RBP8.11□□□□□ -1.11
BDNF-216ENST00000532997 FAM3BP58499 235 aaPredicted RBP8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BDP58876 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BCP62807 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 ID3Q02535 119 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 CLN3Q13286 438 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST2H2BEQ16778 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.11□□□□□ -1.11
BDNF-216ENST00000532997 CST9LP1Q5W188 147 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 GUSBP11Q6P575 273 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 Q8IYB0 196 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 FAM58AQ8N1B3 248 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 SPEM1Q8N4L4 309 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BHQ93079 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 MEGF10Q96KG7 1140 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BNQ99877 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 PHF7Q9BWX1 381 aaPredicted RBP8.11□□□□□ -1.11
BDNF-216ENST00000532997 ZNF665Q9H7R5 613 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 CDH20Q9HBT6 801 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 TINAGQ9UJW2 476 aa8.11□□□□□ -1.11
BDNF-216ENST00000532997 ARGFXA6NJG6 315 aa8.1□□□□□ -1.11
BDNF-216ENST00000532997 FAM157AC9JC47 383 aa8.1□□□□□ -1.11
BDNF-216ENST00000532997 MASP2O00187 686 aa8.1□□□□□ -1.11
BDNF-216ENST00000532997 GCGP01275 180 aa8.1□□□□□ -1.11
BDNF-216ENST00000532997 CYB561P49447 251 aa8.1□□□□□ -1.11
BDNF-216ENST00000532997 SRSF7Q16629 238 aaKnown RBP eCLIP8.1□□□□□ -1.11
BDNF-216ENST00000532997 ZNF818PQ6ZRF7 136 aa8.1□□□□□ -1.11
BDNF-216ENST00000532997 OR5A2Q8NGI9 324 aa8.1□□□□□ -1.11
BDNF-216ENST00000532997 OR2T10Q8NGZ9 312 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms