RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 A0A1B0GX30 115 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A10PA6NDY2 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A18PA6NE21 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A16PA6NEW6 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A20PA6NIJ5 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A7PA6NKC0 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A22PA8MWA6 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A12PA8MX19 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A5PA8MXJ8 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A23PA8MXZ1 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 NOL3O60936 208 aaKnown RBP12.4□□□□□ -0.42
CPSF1-210ENST00000532935 IL1AP01583 271 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 IGLV1-47P01700 117 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A15PP0C7V4 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A13PP0C7W8 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A14PP0C7W9 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM90A24PP0C7X0 464 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 PSMA1P25786 263 aaKnown RBP12.4□□□□□ -0.42
CPSF1-210ENST00000532935 C1orf100Q5SVJ3 147 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 UTF1Q5T230 341 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 LIAT1Q6ZQX7 453 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 ANKRD13BQ86YJ7 626 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 SGMS2Q8NHU3 365 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 RAB2BQ8WUD1 216 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 FAM46BQ96A09 425 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 Q96M66 194 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 IDI2-AS1Q9NZ38 188 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 DPM3Q9P2X0 92 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 TCF19Q9Y242 345 aa12.4□□□□□ -0.42
CPSF1-210ENST00000532935 CCDC160A6NGH7 325 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 MCRIP1C9JLW8 97 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 NPIPB11E5RHQ5 1161 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 TOR1AO14656 332 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 CHST1O43916 411 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 UBBP0CG47 229 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 SSTR5P35346 364 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 DYNLT3P51808 116 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 PRRX1P54821 245 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 PROK1P58294 105 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 HLA-DRB5Q30154 266 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 CNPY1Q3B7I2 92 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 RAB12Q6IQ22 244 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 ZNF497Q6ZNH5 498 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 CLVS1Q8IUQ0 354 aaPredicted RBP12.39□□□□□ -0.43
CPSF1-210ENST00000532935 RFESDQ8TAC1 157 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 CST11Q9H112 138 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 PEX16Q9Y5Y5 336 aa12.39□□□□□ -0.43
CPSF1-210ENST00000532935 A6NDX4 124 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 LEUTXA8MZ59 168 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 F2RL2O00254 374 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 ARL6IP5O75915 188 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 MT-ND4P03905 459 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 CD37P11049 281 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 GZMHP20718 246 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 GABRA5P31644 462 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 FABP5Q01469 135 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 SRSF4Q08170 494 aaKnown RBP12.38□□□□□ -0.43
CPSF1-210ENST00000532935 RBM39Q14498 530 aaKnown RBP12.38□□□□□ -0.43
CPSF1-210ENST00000532935 LTC4SQ16873 150 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 CCBE1Q6UXH8 406 aaPredicted RBP12.38□□□□□ -0.43
CPSF1-210ENST00000532935 OR10A7Q8NGE5 316 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 OR9G1Q8NH87 305 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 CCDC107Q8WV48 283 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 CREB3L1Q96BA8 519 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 ISOC1Q96CN7 298 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 ETAA1Q9NY74 926 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
CPSF1-210ENST00000532935 BUB1B-PAK6H3BSN5 160 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 AIPO00170 330 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 SLC22A1O15245 554 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 MPIG6BO95866 241 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 GLAP06280 429 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 VSIG8P0DPA2 414 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 FUT3P21217 361 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 CALRP27797 417 aaKnown RBP12.37□□□□□ -0.43
CPSF1-210ENST00000532935 HTR2CP28335 458 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 CEACAM3P40198 252 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 SSX1Q16384 188 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 GPR107Q5VW38 600 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 SIGIRRQ6IA17 410 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 OR10K2Q6IF99 312 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 TMEM219Q86XT9 240 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 OR6M1Q8NGM8 313 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 OR4C13Q8NGP0 309 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 LEAP2Q969E1 77 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 YIPF6Q96EC8 236 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 GFI1Q99684 422 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 CITED1Q99966 193 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 NPFFR1Q9GZQ6 430 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 MMP28Q9H239 520 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 RANBP3Q9H6Z4 567 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-210ENST00000532935 PITPNC1Q9UKF7 332 aa12.37□□□□□ -0.43
CPSF1-210ENST00000532935 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 C15orf65H3BRN8 121 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 H3BUI4 141 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 J3QR06 171 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 PDCD6O75340 191 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 IGHV3-7P01780 117 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 PSMB9P28065 219 aa12.36□□□□□ -0.43
CPSF1-210ENST00000532935 KIR2DS4P43632 304 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms