RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 Q6ZS46 218 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 TOMM40LQ969M1 308 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 RBM14Q96PK6 669 aaKnown RBP13.8□□□□□ -0.2
PHRF1-204ENST00000532550 UQCC2Q9BRT2 126 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 SLC25A33Q9BSK2 321 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 TMED9Q9BVK6 235 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 SELENOIQ9C0D9 397 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 VCX3BQ9H321 246 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 BANF2Q9H503 90 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 H0YHG0 523 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 WIPF1O43516 503 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 FBXO24O75426 580 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 OR2F2O95006 317 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 MGMTP16455 207 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 GNG10P50151 68 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 EMX1Q04741 257 aaPredicted RBP13.79□□□□□ -0.2
PHRF1-204ENST00000532550 MADCAM1Q13477 382 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 HIST2H2BDQ6DRA6 164 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 RAB12Q6IQ22 244 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 ZNF497Q6ZNH5 498 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 OR10X1Q8NGY0 326 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 ETAA1Q9NY74 926 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 GHRLQ9UBU3 117 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 PEX16Q9Y5Y5 336 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 MEGF8Q7Z7M0 2845 aa13.79□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A10PA6NDY2 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A18PA6NE21 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A16PA6NEW6 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A20PA6NIJ5 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A7PA6NKC0 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A12PA8MX19 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A5PA8MXJ8 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A23PA8MXZ1 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 AIPO00170 330 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 ORC5O43913 435 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A15PP0C7V4 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A13PP0C7W8 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A14PP0C7W9 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 FAM90A24PP0C7X0 464 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 CD28P10747 220 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 MYF6P23409 242 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 SLC35A2P78381 396 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 GPR50Q13585 617 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 INSL4Q14641 139 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 SYT6Q5T7P8 510 aaPredicted RBP13.78□□□□□ -0.2
PHRF1-204ENST00000532550 GLT8D1Q68CQ7 371 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 CEACAM19Q7Z692 300 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 LYPD6Q86Y78 171 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 THNSL2Q86YJ6 484 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 OR52M1Q8NGK5 317 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 OCSTAMPQ9BR26 566 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 WNT10AQ9GZT5 417 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 RAB9BQ9NP90 201 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 RCC2Q9P258 522 aaKnown RBP13.78□□□□□ -0.2
PHRF1-204ENST00000532550 TRAPPC2LQ9UL33 140 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 LSM2Q9Y333 95 aaKnown RBP13.78□□□□□ -0.2
PHRF1-204ENST00000532550 NOTCH1P46531 2555 aa13.78□□□□□ -0.2
PHRF1-204ENST00000532550 A0A1W2PPE3 182 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 C15orf65H3BRN8 121 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 M0QZK8 103 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 SDCBPO00560 298 aaPredicted RBP13.77□□□□□ -0.21
PHRF1-204ENST00000532550 KCNAB3O43448 404 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 RGS10O43665 173 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 SRMP19623 302 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 FUT3P21217 361 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 RAB7AP51149 207 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 ABCA11PQ4W5N1 156 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 CENPVQ7Z7K6 275 aaPredicted RBP13.77□□□□□ -0.21
PHRF1-204ENST00000532550 TMEM104Q8NE00 496 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 SGCDQ92629 289 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 UFD1Q92890 307 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 CST11Q9H112 138 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 DUSP21Q9H596 190 aa13.77□□□□□ -0.21
PHRF1-204ENST00000532550 ERICH4A6NGS2 130 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 FAM90A9PA6NNJ1 464 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 SPINT2O43291 252 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 CA11O75493 328 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 GLAP06280 429 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 UBBP0CG47 229 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 HES1Q14469 280 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 IRF3Q14653 427 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 NSUN5P1Q3KNT7 163 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 TMEM95Q3KNT9 176 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 HSD17B12Q53GQ0 312 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 RBM48Q5RL73 367 aaKnown RBP13.76□□□□□ -0.21
PHRF1-204ENST00000532550 C6orf183Q5T699 404 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 FAM27D1Q5T7N8 215 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 LIPKQ5VXJ0 399 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 OR8H3Q8N146 312 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 LYG1Q8N1E2 194 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 DRAM1Q8N682 238 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 OR4K15Q8NH41 348 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 UBALD1Q8TB05 177 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 PHYHIPQ92561 330 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 FAM46BQ96A09 425 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 Q96M66 194 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 ANKRD60Q9BZ19 345 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 CCDC90BQ9GZT6 254 aa13.76□□□□□ -0.21
PHRF1-204ENST00000532550 UBE2QL1A1L167 161 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 GAPDHP04406 335 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms