RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 YIPF7Q8N8F6 280 aa13.79□□□□□ -0.2
PKP3-208ENST00000531857 ZFP41Q8N8Y5 198 aa13.79□□□□□ -0.2
PKP3-208ENST00000531857 OR4X2Q8NGF9 303 aa13.79□□□□□ -0.2
PKP3-208ENST00000531857 SLC25A33Q9BSK2 321 aa13.79□□□□□ -0.2
PKP3-208ENST00000531857 BARHL1Q9BZE3 327 aa13.79□□□□□ -0.2
PKP3-208ENST00000531857 ZCCHC4Q9H5U6 513 aa13.79□□□□□ -0.2
PKP3-208ENST00000531857 ABRACLQ9P1F3 81 aa13.79□□□□□ -0.2
PKP3-208ENST00000531857 R4GMQ9 66 aa13.79□□□□□ -0.2
PKP3-208ENST00000531857 H3BSH0 61 aa13.78□□□□□ -0.2
PKP3-208ENST00000531857 H3BUI4 141 aa13.78□□□□□ -0.2
PKP3-208ENST00000531857 PSPNO60542 156 aa13.78□□□□□ -0.2
PKP3-208ENST00000531857 UBE2V2Q15819 145 aa13.78□□□□□ -0.2
PKP3-208ENST00000531857 GRK1Q15835 563 aa13.78□□□□□ -0.2
PKP3-208ENST00000531857 ETV3LQ6ZN32 361 aa13.78□□□□□ -0.2
PKP3-208ENST00000531857 SSX6Q7RTT6 188 aa13.78□□□□□ -0.2
PKP3-208ENST00000531857 MOB1AQ9H8S9 216 aa13.78□□□□□ -0.2
PKP3-208ENST00000531857 FAM172BPA6NC97 362 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 DHRS7CA6NNS2 312 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 J3QRK9 145 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 TPPPO94811 219 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 HAND1O96004 215 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 APOA1P02647 267 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 RAB3BP20337 219 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 DUSP1P28562 367 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 SCAND1P57086 179 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 MXD1Q05195 221 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 ODF4Q2M2E3 257 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 TRIM16LQ309B1 348 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 Q499Y3 187 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 HSD17B12Q53GQ0 312 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 SLC25A26Q70HW3 274 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 MRPL41Q8IXM3 137 aaKnown RBP13.77□□□□□ -0.21
PKP3-208ENST00000531857 OR5AK2Q8NH90 309 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 AKR1E2Q96JD6 320 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 RBM14Q96PK6 669 aaKnown RBP13.77□□□□□ -0.21
PKP3-208ENST00000531857 DPM3Q9P2X0 92 aa13.77□□□□□ -0.21
PKP3-208ENST00000531857 MRM2Q9UI43 246 aaKnown RBP13.77□□□□□ -0.21
PKP3-208ENST00000531857 SIRT4Q9Y6E7 314 aaPredicted RBP13.77□□□□□ -0.21
PKP3-208ENST00000531857 FABP12A6NFH5 140 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 NOTOA8MTQ0 251 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 E9PI62 339 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 CTDSP2O14595 271 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 OR2F2O95006 317 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 PTTG1O95997 202 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 CALCBP10092 127 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 CCL1P22362 96 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 GABRR1P24046 479 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 BRS3P32247 399 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 TALDO1P37837 337 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 PRAMEF5Q5TYX0 476 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 TRAPPC6BQ86SZ2 158 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 ABHD12Q8N2K0 398 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 GPR148Q8TDV2 347 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 CAPSLQ8WWF8 208 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 EMG1Q92979 244 aaKnown RBP13.76□□□□□ -0.21
PKP3-208ENST00000531857 RBFOX1Q9NWB1 397 aaKnown RBP13.76□□□□□ -0.21
PKP3-208ENST00000531857 SLC7A11Q9UPY5 501 aa13.76□□□□□ -0.21
PKP3-208ENST00000531857 RPP14O95059 124 aaKnown RBP13.75□□□□□ -0.21
PKP3-208ENST00000531857 OCM2P0CE71 109 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 OCMP0CE72 109 aaPredicted RBP13.75□□□□□ -0.21
PKP3-208ENST00000531857 GDNFP39905 211 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 NPBWR2P48146 333 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 OXA1LQ15070 435 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 C9orf152Q5JTZ5 239 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 HACD4Q5VWC8 232 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 OR2G2Q8NGZ5 317 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 C15orf40Q8WUR7 153 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 DIRAS2Q96HU8 199 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 DAPK2Q9UIK4 370 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 HHLA2Q9UM44 414 aa13.75□□□□□ -0.21
PKP3-208ENST00000531857 UBE2J1Q9Y385 318 aaPredicted RBP13.75□□□□□ -0.21
PKP3-208ENST00000531857 TRBV5-5A0A0J9YX44 114 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 MGST3O14880 152 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 IGLV1-47P01700 117 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 OR3A1P47881 315 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 FUT6P51993 359 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 SNU13P55769 128 aaKnown RBP13.74□□□□□ -0.21
PKP3-208ENST00000531857 P2RX3P56373 397 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 SCN1BQ07699 218 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 UTF1Q5T230 341 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 C18orf65Q6ZTR6 163 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 ZNF329Q86UD4 541 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 OSR2Q8N2R0 312 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 CENPSQ8N2Z9 138 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 DPF1Q92782 380 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 PLEKHA1Q9HB21 404 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 SEBOXQ9HB31 216 aaPredicted RBP13.74□□□□□ -0.21
PKP3-208ENST00000531857 ZNF286AQ9HBT8 521 aa13.74□□□□□ -0.21
PKP3-208ENST00000531857 PSMB11A5LHX3 300 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 OR4C45A6NMZ5 311 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 LEUTXA8MZ59 168 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 CD2P06729 351 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 SRMP19623 302 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 BCL3P20749 454 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 CDK2P24941 298 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 ERP29P30040 261 aaKnown RBP13.73□□□□□ -0.21
PKP3-208ENST00000531857 THBS3P49746 956 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 RPS11P62280 158 aaKnown RBP eCLIP13.73□□□□□ -0.21
PKP3-208ENST00000531857 SFXN4Q6P4A7 337 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 RTN4RL2Q86UN3 420 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms