RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 RCN1Q15293 331 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 ZSCAN26Q16670 478 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 CXorf66Q5JRM2 361 aaPredicted RBP6.96□□□□□ -1.3
USF1-210ENST00000531842 OGFRL1Q5TC84 451 aaPredicted RBP6.96□□□□□ -1.3
USF1-210ENST00000531842 ZNF691Q5VV52 312 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 FOXRED2Q8IWF2 684 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 ACBD7Q8N6N7 88 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 Q8N9W7 124 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 CHST4Q8NCG5 386 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 OR9G1Q8NH87 305 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 CNIH3Q8TBE1 160 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 CASTOR1Q8WTX7 329 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 NRG4Q8WWG1 115 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 RGP1Q92546 391 aaPredicted RBP6.96□□□□□ -1.3
USF1-210ENST00000531842 EAF1Q96JC9 268 aaPredicted RBP6.96□□□□□ -1.3
USF1-210ENST00000531842 C4orf36Q96KX1 117 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 TM2D3Q9BRN9 247 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 ZCCHC4Q9H5U6 513 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 ZMAT4Q9H898 229 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 ERVK13-1Q9NX77 482 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 SMPD3Q9NY59 655 aaPredicted RBP6.96□□□□□ -1.3
USF1-210ENST00000531842 OR6C3Q9NZP0 311 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 PSG11Q9UQ72 335 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 AMMECR1Q9Y4X0 333 aaPredicted RBP6.96□□□□□ -1.3
USF1-210ENST00000531842 ORC6Q9Y5N6 252 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 SIRT4Q9Y6E7 314 aaPredicted RBP6.96□□□□□ -1.3
USF1-210ENST00000531842 MEIKINA0A087WXM9 373 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 KBTBD11-OT1A0A1B0GTJ5 212 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 SNTNA6NMZ2 147 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 ZNF729A6NN14 1252 aaPredicted RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 OOSP1A8MZH6 123 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 G3V318 75 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 SLC33A1O00400 549 aaPredicted RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 CASQ2O14958 399 aaPredicted RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 SAP30O75446 220 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 LALBAP00709 142 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 GP9P14770 177 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 C21orf33P30042 268 aaPredicted RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 SLC6A1P30531 599 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 ETV1P50549 477 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 CCR9P51686 369 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 GTF2A1P52655 376 aaPredicted RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 GP2P55259 537 aaKnown RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 CFHR3Q02985 330 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 GALEQ14376 348 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 PAN3Q58A45 887 aaKnown RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 Q6P435 159 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 MOB3BQ86TA1 216 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 SATL1Q86VE3 508 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 THNSL2Q86YJ6 484 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 SAXO1Q8IYX7 474 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 ZNF485Q8NCK3 441 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 OR5D14Q8NGL3 314 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 FBLIM1Q8WUP2 373 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 C4orf3Q8WVX3 66 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 MRPL48Q96GC5 212 aaKnown RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 MYCBPQ99417 103 aaPredicted RBP6.95□□□□□ -1.3
USF1-210ENST00000531842 GPER1Q99527 375 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 ALG8Q9BVK2 526 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 JAM3Q9BX67 310 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 BARHL1Q9BZE3 327 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 COMMD4Q9H0A8 199 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 RHOFQ9HBH0 211 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 PCDHB16Q9NRJ7 776 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 PLSCR3Q9NRY6 295 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 KIF25Q9UIL4 384 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 WSB1Q9Y6I7 421 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 KMT2AQ03164 3969 aa6.95□□□□□ -1.3
USF1-210ENST00000531842 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 A0A087X0M5 115 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 A0A1B0GX30 115 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 H0YJX3 145 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 AP4M1O00189 453 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 CCRL2O00421 344 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 MAGEB3O15480 346 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 FGF16O43320 207 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 MT-ND2P03891 347 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 CSN2P05814 226 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 CGB3P0DN86 165 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 CGB7P0DN87 165 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 IGHV4-30-4P0DP06 118 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 SSTR5P35346 364 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 F2RL1P55085 397 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 RAB40BQ12829 278 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 FOXE3Q13461 319 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 MADCAM1Q13477 382 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 ALKBH1Q13686 389 aaKnown RBP6.94□□□□□ -1.3
USF1-210ENST00000531842 KISS1Q15726 138 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 SERPINA12Q8IW75 414 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 C10orf67Q8IYJ2 551 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 SYS1Q8N2H4 156 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 COMMD1Q8N668 190 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 Q8N6K4 173 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 RNF152Q8N8N0 203 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 OR1N2Q8NGR9 330 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 OR10X1Q8NGY0 326 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 PLPPR1Q8TBJ4 325 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 TSEN15Q8WW01 171 aaKnown RBP6.94□□□□□ -1.3
USF1-210ENST00000531842 DLX4Q92988 240 aaPredicted RBP6.94□□□□□ -1.3
USF1-210ENST00000531842 ISOC1Q96CN7 298 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms