RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 IL12AP29459 219 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 GRPRP30550 384 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 OR1E2P47887 323 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 HCCSP53701 268 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 AQP5P55064 265 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 DLX1P56177 255 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 FBXW4P57775 412 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 MAXP61244 160 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 NCS1P62166 190 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 RPL8P62917 257 aaKnown RBP2.53□□□□□ -2
PTPRK-220ENST00000531466 GNGT1P63211 74 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 PSG4Q00888 419 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 FMODQ06828 376 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 BTN1A1Q13410 526 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 VGLL4Q14135 290 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 SLC10A1Q14973 349 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 TGIF1Q15583 401 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 NEDD8Q15843 81 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 GUCA2BQ16661 112 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 PARP15Q460N3 678 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 DCST2Q5T1A1 773 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 AVPI1Q5T686 147 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 DCAF12Q5T6F0 453 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 FAM27D1Q5T7N8 215 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 C1orf195Q5TG92 126 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 DUX4L9Q6RFH8 374 aaPredicted RBP2.53□□□□□ -2
PTPRK-220ENST00000531466 WDR82Q6UXN9 313 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 CYS1Q717R9 158 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 TSEN54Q7Z6J9 526 aaKnown RBP2.53□□□□□ -2
PTPRK-220ENST00000531466 OAFQ86UD1 273 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 CEND1Q8N111 149 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 ZADH2Q8N4Q0 377 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 C15orf54Q8N8G6 183 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 OR5A2Q8NGI9 324 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 OR5A1Q8NGJ0 315 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 OR1S2Q8NGQ3 325 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 OR4F5Q8NH21 305 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 OR4X1Q8NH49 305 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 CNIH3Q8TBE1 160 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 GNPDA2Q8TDQ7 276 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 BORCS7Q96B45 105 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 ISOC1Q96CN7 298 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 DDIT4LQ96D03 193 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 DNAJC19Q96DA6 116 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 PIK3IP1Q96FE7 263 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 DIRAS2Q96HU8 199 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 P2RX4Q99571 388 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 GABRG3Q99928 467 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 LXNQ9BS40 222 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 PSMG3Q9BT73 122 aaPredicted RBP2.53□□□□□ -2
PTPRK-220ENST00000531466 IFI27L2Q9H2X8 130 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 OR51I1Q9H343 314 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 Q9HAA7 133 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 TAF9BQ9HBM6 251 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 SLC25A19Q9HC21 320 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 MMP26Q9NRE1 261 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 CISHQ9NSE2 258 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 LYRM2Q9NU23 88 aaPredicted RBP2.53□□□□□ -2
PTPRK-220ENST00000531466 TMEM38BQ9NVV0 291 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 SIGLEC8Q9NYZ4 499 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 LSM7Q9UK45 103 aaKnown RBP2.53□□□□□ -2
PTPRK-220ENST00000531466 CARHSP1Q9Y2V2 147 aaKnown RBP2.53□□□□□ -2
PTPRK-220ENST00000531466 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.53□□□□□ -2
PTPRK-220ENST00000531466 OARD1Q9Y530 152 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 WSB1Q9Y6I7 421 aa2.53□□□□□ -2
PTPRK-220ENST00000531466 NACAE9PAV3 2078 aa2.53□□□□□ -2.01
PTPRK-220ENST00000531466 PRDM15P57071 1507 aaPredicted RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ABCC10Q5T3U5 1492 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 NPHP4O75161 1426 aaPredicted RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 PIK3C2GO75747 1445 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 NSD3Q9BZ95 1437 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CNTNAP1P78357 1384 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 MEIKINA0A087WXM9 373 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 TRAV39A0A0B4J263 110 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 IGHV2-70DA0A0C4DH43 119 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 PNMA8CA0A1B0GUJ8 204 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CEACAM18A8MTB9 384 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 C1orf196B1AJZ1 125 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CORTO00230 105 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 MBTPS2O43462 519 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 TOXO94900 526 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 C1orf105O95561 183 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 IFNA7P01567 189 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CD8AP01732 235 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 HSD17B1P14061 328 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CD99P14209 185 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 RAB5AP20339 215 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CRHBPP24387 322 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 KIR2DS4P43632 304 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 TFPI2P48307 235 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 SSR4P51571 173 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 RAB38P57729 211 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 TAS2R30P59541 319 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 HSPE1P61604 102 aaKnown RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 CDK6Q00534 326 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 RPL18AQ02543 176 aaKnown RBP2.52□□□□□ -2.01
PTPRK-220ENST00000531466 PSG7Q13046 419 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF154Q13106 437 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 PPP1R1AQ13522 171 aa2.52□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF846Q147U1 533 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms