RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 OR51B6Q9H340 312 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 CDH20Q9HBT6 801 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 NCOR1O75376 2440 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 RHBDL1O75783 438 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 SELEP16581 610 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 POLR2GP62487 172 aaKnown RBP eCLIP14.63□□□□□ -0.07
BRCA2-204ENST00000530893 GABRA6Q16445 453 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 MIDNQ504T8 468 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 TMEM88Q6PEY1 159 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 INO80CQ6PI98 192 aaPredicted RBP14.63□□□□□ -0.07
BRCA2-204ENST00000530893 C17orf78Q8N4C9 275 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 LFNGQ8NES3 379 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 C19orf12Q9NSK7 152 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 CLCF1Q9UBD9 225 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 UMAD1C9J7I0 102 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 AGPAT2O15120 278 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 NPBWR1P48145 328 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 ZNF616Q08AN1 781 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 HFEQ30201 348 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 SPATA46Q5T0L3 261 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 C5orf24Q7Z6I8 188 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 TMEM252Q8N6L7 170 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 WNT2BQ93097 391 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 AKR1E2Q96JD6 320 aa14.63□□□□□ -0.07
BRCA2-204ENST00000530893 ADAT1Q9BUB4 502 aaKnown RBP14.63□□□□□ -0.07
BRCA2-204ENST00000530893 FAM24AA6NFZ4 105 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 TMEM210A6NLX4 147 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 CDRT15L2A8MXV6 281 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 PRH1P02810 166 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 ACAA1P09110 424 aaPredicted RBP14.62□□□□□ -0.07
BRCA2-204ENST00000530893 IGHV1-2P23083 117 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 ZNF146Q15072 292 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 OR8G1Q15617 311 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 ZNF497Q6ZNH5 498 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 Q6ZT83 130 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 FAM214BQ7L5A3 538 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 KDF1Q8NAX2 398 aaPredicted RBP14.62□□□□□ -0.07
BRCA2-204ENST00000530893 SCCPDHQ8NBX0 429 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 PCNX2A6NKB5 2137 aa14.62□□□□□ -0.07
BRCA2-204ENST00000530893 A0A1B0GU03 582 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 IGSF23A1L1A6 192 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 IQCF6A8MYZ5 107 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.61□□□□□ -0.07
BRCA2-204ENST00000530893 HSPA12AO43301 675 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 SSSCA1O60232 199 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 TSPAN9O75954 239 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 LMO1P25800 156 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 ID4P47928 161 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 CXorf66Q5JRM2 361 aaPredicted RBP14.61□□□□□ -0.07
BRCA2-204ENST00000530893 CBLN2Q8IUK8 224 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 SUMF1Q8NBK3 374 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 HSD17B11Q8NBQ5 300 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 OR10V1Q8NGI7 309 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 OR2J1Q9GZK6 312 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 ERRFI1Q9UJM3 462 aaPredicted RBP14.61□□□□□ -0.07
BRCA2-204ENST00000530893 MED12LQ86YW9 2145 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 ESPL1Q14674 2120 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 F12P00748 615 aaPredicted RBP14.61□□□□□ -0.07
BRCA2-204ENST00000530893 PGA5P0DJD9 388 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 GUSBP1Q15486 140 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 GUK1Q16774 197 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 PIP4P1Q86T03 277 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 WDR86Q86TI4 376 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 OR8G5Q8NG78 346 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 PLPPR1Q8TBJ4 325 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 PBDC1Q9BVG4 233 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 SH3BGRL3Q9H299 93 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 SMDT1Q9H4I9 107 aa14.61□□□□□ -0.07
BRCA2-204ENST00000530893 A0A1B0GW64 132 aa14.6□□□□□ -0.07
BRCA2-204ENST00000530893 WRBO00258 174 aa14.6□□□□□ -0.07
BRCA2-204ENST00000530893 SLC33A1O00400 549 aaPredicted RBP14.6□□□□□ -0.07
BRCA2-204ENST00000530893 OR2H2O95918 312 aa14.6□□□□□ -0.07
BRCA2-204ENST00000530893 SERPINE2P07093 398 aa14.6□□□□□ -0.07
BRCA2-204ENST00000530893 IDH3GP51553 393 aaPredicted RBP14.6□□□□□ -0.07
BRCA2-204ENST00000530893 IGFL2Q6UWQ7 119 aa14.6□□□□□ -0.07
BRCA2-204ENST00000530893 TMPRSS7Q7RTY8 843 aa14.6□□□□□ -0.07
BRCA2-204ENST00000530893 GNPNAT1Q96EK6 184 aaPredicted RBP14.6□□□□□ -0.07
BRCA2-204ENST00000530893 MBNL3Q9NUK0 354 aaKnown RBP14.6□□□□□ -0.07
BRCA2-204ENST00000530893 BDP1A6H8Y1 2624 aa14.6□□□□□ -0.07
BRCA2-204ENST00000530893 DOCK7Q96N67 2140 aa14.6□□□□□ -0.07
BRCA2-204ENST00000530893 C9JQL5 133 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 PROB1E7EW31 1015 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 K7N7A8 449 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 SH2D1BO14796 132 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 CELA3BP08861 270 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 TUBG1P23258 451 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 PAX6P26367 422 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 FIP1L1Q6UN15 594 aaKnown RBP14.59□□□□□ -0.07
BRCA2-204ENST00000530893 MYPOPQ86VE0 399 aaPredicted RBP14.59□□□□□ -0.07
BRCA2-204ENST00000530893 C1orf162Q8NEQ5 155 aaPredicted RBP14.59□□□□□ -0.07
BRCA2-204ENST00000530893 LSM10Q969L4 123 aaKnown RBP14.59□□□□□ -0.07
BRCA2-204ENST00000530893 SCRT1Q9BWW7 348 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 PARP12Q9H0J9 701 aaKnown RBP14.59□□□□□ -0.07
BRCA2-204ENST00000530893 TUBG2Q9NRH3 451 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 PRELID1Q9Y255 219 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 RNF115Q9Y4L5 304 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 WIPI2Q9Y4P8 454 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 TNFSF12O43508 249 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 CD200P41217 278 aa14.59□□□□□ -0.07
BRCA2-204ENST00000530893 ZNF154Q13106 437 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms