RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 WFDC8Q8IUA0 241 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 BCL2L2Q92843 193 aaPredicted RBP12.21□□□□□ -0.46
PCF11-204ENST00000530660 HDAC8Q9BY41 377 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 OR10A5Q9H207 317 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 IL19Q9UHD0 177 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 TDRD6O60522 2096 aaKnown RBP12.21□□□□□ -0.46
PCF11-204ENST00000530660 A6NCN8 305 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
PCF11-204ENST00000530660 SYNGR4O95473 234 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 ZNF10P21506 573 aaPredicted RBP12.2□□□□□ -0.46
PCF11-204ENST00000530660 VIPR2P41587 438 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 MSMO1Q15800 293 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 CA13Q8N1Q1 262 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 HOXB13Q92826 284 aaPredicted RBP12.2□□□□□ -0.46
PCF11-204ENST00000530660 KIR3DX1Q9H7L2 352 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 ZNF430Q9H8G1 570 aaPredicted RBP12.2□□□□□ -0.46
PCF11-204ENST00000530660 VSTM2BA6NLU5 285 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 SERPINE3A8MV23 424 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 ADAM20O43506 726 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 ZNF17P17021 662 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 PAFAH1B2P68402 229 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 TMEM267Q0VDI3 215 aaPredicted RBP12.2□□□□□ -0.46
PCF11-204ENST00000530660 KCNIP4Q6PIL6 250 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 FIGLAQ6QHK4 219 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 C1orf174Q8IYL3 243 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 Q8N976 141 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 FLVCR1-AS1Q8TAF5 88 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 SLAMF6Q96DU3 332 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 AGMATQ9BSE5 352 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 RTN4RQ9BZR6 473 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 WNT10AQ9GZT5 417 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 PLK3Q9H4B4 646 aa12.2□□□□□ -0.46
PCF11-204ENST00000530660 CXCL10P02778 98 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
PCF11-204ENST00000530660 DUSP3P51452 185 aaPredicted RBP12.19□□□□□ -0.46
PCF11-204ENST00000530660 BIDP55957 195 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 ATOH7Q8N100 152 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 OR2D3Q8NGH3 330 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 TXNIPQ9H3M7 391 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 PRR19A6NJB7 356 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 MMP23AO75900 390 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 TNFSF4P23510 183 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 MRPL49Q13405 166 aaKnown RBP12.19□□□□□ -0.46
PCF11-204ENST00000530660 RD3Q7Z3Z2 195 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 UEVLDQ8IX04 471 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 SLC38A9Q8NBW4 561 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 ST6GALNAC3Q8NDV1 305 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
PCF11-204ENST00000530660 RNF133Q8WVZ7 376 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 NAT6Q93015 286 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 GPR146Q96CH1 333 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 ANAPC16Q96DE5 110 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 ZDHHC11Q9H8X9 412 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 DEC1Q9P2X7 70 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 CLEC18AA5D8T8 446 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 SEC13P55735 322 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 CLEC18CQ8NCF0 446 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 C16orf52Q8NHV5 167 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 MBD3L1Q8WWY6 194 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 FAM3CQ92520 227 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 MRGPRX1Q96LB2 322 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 BET1LQ9NYM9 111 aa12.19□□□□□ -0.46
PCF11-204ENST00000530660 DUXBA0A1W2PPF3 345 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 TGFBR3LH3BV60 316 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 VAMP5O95183 116 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 WNT2P09544 360 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 SLC35E2P0CK97 266 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 OR4F5Q8NH21 305 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 CCL4L1Q8NHW4 92 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 LHX4Q969G2 390 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 SLC46A1Q96NT5 459 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 OR4F4Q96R69 305 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 FGF22Q9HCT0 170 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 CLN8Q9UBY8 286 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 TRAV30A0A087WSZ9 112 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 A0A1W2PP55 124 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 NUDT14O95848 222 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 IFNA5P01569 189 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 DTYMKP23919 212 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 KISS1Q15726 138 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 MORN2Q502X0 79 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 C20orf196Q8IYI0 205 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 OR2M3Q8NG83 312 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 ZNF596Q8TC21 504 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 RERGQ96A58 199 aaPredicted RBP12.18□□□□□ -0.46
PCF11-204ENST00000530660 VDAC3Q9Y277 283 aa12.18□□□□□ -0.46
PCF11-204ENST00000530660 ZNF814B7Z6K7 855 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 H0YIG0 161 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 GOSR1O95249 250 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 CBLN1P23435 193 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 TSPOP30536 169 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 LCN2P80188 198 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 BAGE3Q86Y29 109 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 BAGE2Q86Y30 109 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 LIN37Q96GY3 246 aaPredicted RBP12.17□□□□□ -0.46
PCF11-204ENST00000530660 NECAP2Q9NVZ3 263 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 SLC17A4Q9Y2C5 497 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 ODAMA1E959 279 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 C1QTNF9BB2RNN3 333 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms