RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 NOTCH3Q9UM47 2321 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 hCG_38984A0A1B0GV85 526 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 A0A1B0GW55 424 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DHRS12A0PJE2 317 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 TMEM210A6NLX4 147 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 G3V4G9 280 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 H3BUX3 64 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 CCL24O00175 119 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 ZNF593O00488 134 aaPredicted RBP4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 CDIPTO14735 213 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 SCGB2A1O75556 95 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 FABP3P05413 133 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX4L2P0CJ85 424 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX4L3P0CJ86 424 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX4L4P0CJ87 422 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX4L5P0CJ88 424 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX4L6P0CJ89 424 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX4L7P0CJ90 424 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 HSD11B1P28845 292 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 RRM2P31350 389 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 TGM4P49221 684 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 BLVRAP53004 296 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 CSNK2BP67870 215 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 FAM3AP98173 230 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 PDZK1IP1Q13113 114 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 KLRD1Q13241 179 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 TEX30Q5JUR7 227 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 KPRPQ5T749 579 aaPredicted RBP4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 SLC25A24Q6NUK1 477 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX4L9Q6RFH8 374 aaPredicted RBP4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 WDR82Q6UXN9 313 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 WDR86Q86TI4 376 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 C11orf53Q8IXP5 236 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 FGFRL1Q8N441 504 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 LINC00471Q8N535 108 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 RNF148Q8N7C7 305 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 Q8N7P7 452 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 SLC37A3Q8NCC5 494 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 OR52H1Q8NGJ2 320 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 OR51L1Q8NGJ5 315 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 OR51G2Q8NGK0 314 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 OR5D13Q8NGL4 314 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 OR6K6Q8NGW6 343 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 OR10Z1Q8NGY1 313 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 OR2T6Q8NHC8 308 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 REEP6Q96HR9 211 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 PYURFQ96I23 114 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 TXN2Q99757 166 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 SSX3Q99909 188 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 RTL8AQ9BWD3 113 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 TLNRD1Q9H1K6 362 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 RGCCQ9H4X1 137 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 C5orf66Q9H5L9 145 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 RANBP3Q9H6Z4 567 aaPredicted RBP4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 EGLN3Q9H6Z9 239 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DCLRE1BQ9H816 532 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 GORASP2Q9H8Y8 452 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 ABCB9Q9NP78 766 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 ADA2Q9NZK5 511 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 CNOT2Q9NZN8 540 aaKnown RBP4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 DUX4Q9UBX2 424 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 MRPS28Q9Y2Q9 187 aaKnown RBP4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 MAB21L2Q9Y586 359 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 MPC1Q9Y5U8 109 aa4.05□□□□□ -1.76
AMBRA1-209ENST00000529963 TET2Q6N021 2002 aaPredicted RBP4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 SIGLEC5O15389 551 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 SYT7O43581 403 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 IFNGP01579 166 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 SEMG1P04279 462 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 PSKH1P11801 424 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 PAICSP22234 425 aaKnown RBP4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 KIR2DS4P43632 304 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 EFNB2P52799 333 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 SLC25A1P53007 311 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 CAV3P56539 151 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 ELF3P78545 371 aaPredicted RBP4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 PRB3Q04118 309 aaPredicted RBP4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 EIF2B1Q14232 305 aaKnown RBP4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 FAM189A2Q15884 450 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 AANATQ16613 207 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 LRRC75BQ2VPJ9 315 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 RASSF6Q6ZTQ3 369 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 NOTCH2NLQ7Z3S9 236 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 COX8CQ7Z4L0 72 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 PNKDQ8N490 385 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 OR4S1Q8NGB4 309 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 OR5T2Q8NGG2 359 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 OR13C3Q8NGS6 347 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 RNF133Q8WVZ7 376 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 TMEM190Q8WZ59 177 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 THRSPQ92748 146 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 TNFRSF14Q92956 283 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 SGK3Q96BR1 496 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 SEH1LQ96EE3 360 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 DUS3LQ96G46 650 aaKnown RBP4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 GAFA1Q96PS6 74 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 TMEM231Q9H6L2 316 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 IL1RAPQ9NPH3 570 aa4.04□□□□□ -1.76
AMBRA1-209ENST00000529963 MED4Q9NPJ6 270 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms