RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 OCSTAMPQ9BR26 566 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 C7orf69Q9H7B7 122 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 AUNIPQ9H7T9 357 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 LINC00574Q9H8X3 128 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 HIF1ANQ9NWT6 349 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 ONECUT1Q9UBC0 465 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 IL36RNQ9UBH0 155 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 AK3Q9UIJ7 227 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 KIF25Q9UIL4 384 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 JPT1Q9UK76 154 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 SESN1Q9Y6P5 492 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 MYO9AB2RTY4 2548 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 WNK2Q9Y3S1 2297 aa6.56□□□□□ -1.36
SSBP3-211ENST00000528787 CR1P17927 2039 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 PDZD2O15018 2839 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 A0A0B4J203 849 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 CENPXA8MT69 81 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 C17orf98A8MV24 154 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 A8MV72 311 aaPredicted RBP6.55□□□□□ -1.36
SSBP3-211ENST00000528787 KIAA1324LA8MWY0 1029 aaPredicted RBP6.55□□□□□ -1.36
SSBP3-211ENST00000528787 FAM157AC9JC47 383 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 TOR1AO14656 332 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 ITGB1BP1O14713 200 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 SMAD7O15105 426 aaKnown RBP6.55□□□□□ -1.36
SSBP3-211ENST00000528787 EIF4EP06730 217 aaKnown RBP6.55□□□□□ -1.36
SSBP3-211ENST00000528787 CSF1P09603 554 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 GNB3P16520 340 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 AMY2BP19961 511 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 PRTN3P24158 256 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 FPR2P25090 351 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 TNFSF8P32971 234 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 ECI1P42126 302 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 OR3A3P47888 321 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 GLIPR1P48060 266 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 EFNB2P52799 333 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 TMEM50BP56557 158 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 PAX8Q06710 450 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 CNPY1Q3B7I2 92 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 TMEM200BQ69YZ2 307 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 SIGIRRQ6IA17 410 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 CCDC144NLQ6NUI1 221 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 FAHD2BQ6P2I3 314 aaPredicted RBP6.55□□□□□ -1.36
SSBP3-211ENST00000528787 C8orf31Q8N9H6 132 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 OR6Q1Q8NGQ2 317 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 OR10J5Q8NHC4 309 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 ARL11Q969Q4 196 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 MSI2Q96DH6 328 aaKnown RBP6.55□□□□□ -1.36
SSBP3-211ENST00000528787 FAHD2AQ96GK7 314 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 NKX3-1Q99801 234 aaPredicted RBP6.55□□□□□ -1.36
SSBP3-211ENST00000528787 GINS4Q9BRT9 223 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 TMUB1Q9BVT8 246 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 Q9N2K0 584 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 NECAP2Q9NVZ3 263 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 CALYQ9NYX4 217 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 GNG12Q9UBI6 72 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 CDC42EP3Q9UKI2 254 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 KIAA2026Q5HYC2 2103 aa6.55□□□□□ -1.36
SSBP3-211ENST00000528787 A0A0A6YYD4 124 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 PIGBOS1A0A0B4J2F0 54 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 TMEM235A6NFC5 223 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 SDCBPO00560 298 aaPredicted RBP6.54□□□□□ -1.36
SSBP3-211ENST00000528787 CTDSP2O14595 271 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 FABP7O15540 132 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 TXNL1O43396 289 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 GSTZ1O43708 216 aaPredicted RBP6.54□□□□□ -1.36
SSBP3-211ENST00000528787 IFNA6P05013 189 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 FCGR3AP08637 254 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 IGHV1-8P0DP01 117 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 TAS2R19P59542 299 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 SEC61A1P61619 476 aaKnown RBP6.54□□□□□ -1.36
SSBP3-211ENST00000528787 HLA-DRB3P79483 266 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 ZNF846Q147U1 533 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 MEF2DQ14814 521 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 HMGN3Q15651 99 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 MIDNQ504T8 468 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 PYDC2Q56P42 97 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 PLAC9Q5JTB6 97 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 LPCAT3Q6P1A2 487 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 ZNF880Q6PDB4 577 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 C11orf88Q6PI97 169 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 CLEC9AQ6UXN8 241 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 HOGA1Q86XE5 327 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 LAX1Q8IWV1 398 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 DTX3Q8N9I9 347 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 BEST4Q8NFU0 473 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 OR4M1Q8NGD0 313 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 OR5H2Q8NGV7 314 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 OR4K15Q8NH41 348 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 OR9G1Q8NH87 305 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 MRPL30Q8TCC3 161 aaKnown RBP6.54□□□□□ -1.36
SSBP3-211ENST00000528787 MRGPRDQ8TDS7 321 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 SMIM4Q8WVI0 70 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 UPRTQ96BW1 309 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 COQ2Q96H96 371 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 SCGB3A2Q96PL1 93 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 ST6GALNAC5Q9BVH7 336 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 CLEC7AQ9BXN2 247 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 KCNK15Q9H427 330 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 TAF9BQ9HBM6 251 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 OR2S2Q9NQN1 319 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms