RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 EEDO75530 441 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 GCM2O75603 506 aaPredicted RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 PIAS1O75925 651 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 ATG12O94817 140 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 RBMY1DP0C7P1 496 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 UBBP0CG47 229 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 RBMY1A1P0DJD3 496 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 TDGF1P13385 188 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 IGFBP3P17936 291 aaPredicted RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 AZU1P20160 251 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 RAB3BP20337 219 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 FGF7P21781 194 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 MDH2P40926 338 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 RIPPLY3P57055 190 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 PFN3P60673 137 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 SELENOWP63302 87 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 TGFBR3Q03167 851 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 CD164Q04900 197 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 FMODQ06828 376 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 GINS1Q14691 196 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 ZNF846Q147U1 533 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 SNRNP35Q16560 246 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 LRRC26Q2I0M4 334 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 HLA-DRB5Q30154 266 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 TRMT12Q53H54 448 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 PYY3Q5JQD4 70 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 AKR1C8PQ5T2L2 129 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 GLYATQ6IB77 296 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 FBXL22Q6P050 247 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 DCUN1D2Q6PH85 259 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 OPN5Q6U736 354 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 STRADAQ7RTN6 431 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 CMC1Q7Z7K0 106 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 CROCCP2Q86T23 111 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 ZNF567Q8N184 647 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 CA13Q8N1Q1 262 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 C6orf223Q8N319 242 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 C11orf42Q8N5U0 333 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 TMEM86BQ8N661 226 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 GATD1Q8NB37 220 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 OR9I1Q8NGQ6 314 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 OR5B3Q8NH48 314 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 OR5K2Q8NHB8 316 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 ZNRF2Q8NHG8 242 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 RHOXF1Q8NHV9 184 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 ZNF502Q8TBZ5 544 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 CANT1Q8WVQ1 401 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 DEDD2Q8WXF8 326 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 RCN3Q96D15 328 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 VSIG2Q96IQ7 327 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 BTF3L4Q96K17 158 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 GPR82Q96P67 336 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 SIGLEC12Q96PQ1 595 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 KIR2DL4Q99706 377 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 CMSS1Q9BQ75 279 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 LXNQ9BS40 222 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 EFCAB11Q9BUY7 163 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 REG4Q9BYZ8 158 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 LINC00470Q9BZP3 86 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 POLR2J2Q9GZM3 115 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 MAP1LC3BQ9GZQ8 125 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 POLR2J3Q9H1A7 115 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 C20orf85Q9H1P6 137 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 MS4A6AQ9H2W1 248 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 OR51I1Q9H343 314 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 PRORYQ9H606 182 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 METTL17Q9H7H0 456 aaPredicted RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 RNF122Q9H9V4 155 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 ENY2Q9NPA8 101 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 HRASLS2Q9NWW9 162 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 FAM206AQ9NX38 181 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 CALYQ9NYX4 217 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 TMEM216Q9P0N5 145 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 ERG28Q9UKR5 140 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 MYOM3Q5VTT5 1437 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 A0A1W2PP64 1363 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 PSME4Q14997 1843 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 GON4LQ3T8J9 2241 aa2.46□□□□□ -2.01
CD44-229ENST00000528672 GRIN2BQ13224 1484 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 TRAV39A0A0B4J263 110 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 A0A0G2JN53 185 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 CIB4A0PJX0 185 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 TSPAN11A1L157 253 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 FAM231BA6NCW3 169 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 USP27XA6NNY8 438 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 CEACAM18A8MTB9 384 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 C1orf196B1AJZ1 125 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 TRIM49D1C9J1S8 452 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 MFNGO00587 321 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 AGPAT2O15120 278 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 MRPS12O15235 138 aaKnown RBP2.46□□□□□ -2.02
CD44-229ENST00000528672 OR7C2O60412 319 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 ZNF354AO60765 605 aaPredicted RBP2.46□□□□□ -2.02
CD44-229ENST00000528672 RDH16O75452 317 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 CDS2O95674 445 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 PAEPP09466 180 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 IL7P13232 177 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 PSMB1P20618 241 aaKnown RBP2.46□□□□□ -2.02
CD44-229ENST00000528672 BRS3P32247 399 aa2.46□□□□□ -2.02
CD44-229ENST00000528672 PYCR1P32322 319 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms