RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 RAB12Q6IQ22 244 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 CCDC144NLQ6NUI1 221 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 IZUMO2Q6UXV1 221 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 Q6ZS46 218 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 CEACAM19Q7Z692 300 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 LYG1Q8N1E2 194 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 MS4A15Q8N5U1 240 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 TMEM104Q8NE00 496 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 OR10X1Q8NGY0 326 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 UFD1Q92890 307 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 ARL11Q969Q4 196 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 TMEM203Q969S6 136 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 SLC25A33Q9BSK2 321 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 SPACA1Q9HBV2 294 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 ETAA1Q9NY74 926 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 LSM2Q9Y333 95 aaKnown RBP12.46□□□□□ -0.41
CAPN1-213ENST00000527897 PEX16Q9Y5Y5 336 aa12.46□□□□□ -0.41
CAPN1-213ENST00000527897 IGHV3-43A0A0B4J1X8 118 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A22PA8MWA6 464 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 MPIG6BO95866 241 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 IGHV3-43DP0DP04 118 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 GZMHP20718 246 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 VDAC2P45880 294 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-213ENST00000527897 SLC35A2P78381 396 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 RNLSQ5VYX0 342 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 CDH26Q8IXH8 852 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 PRR18Q8N4B5 295 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 OR4K15Q8NH41 348 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 MRPS24Q96EL2 167 aaKnown RBP12.45□□□□□ -0.42
CAPN1-213ENST00000527897 AKR1E2Q96JD6 320 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 CNBD2Q96M20 576 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 ANKRD60Q9BZ19 345 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 SERTAD4Q9NUC0 356 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 TRAPPC2LQ9UL33 140 aa12.45□□□□□ -0.42
CAPN1-213ENST00000527897 UBE2QL1A1L167 161 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 SH2D7A6NKC9 451 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-213ENST00000527897 NPIPB11E5RHQ5 1161 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 SDCBPO00560 298 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-213ENST00000527897 FBXO24O75426 580 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 MT-ND4P03905 459 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 PAX5Q02548 391 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 MADCAM1Q13477 382 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 HES1Q14469 280 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 NSUN5P1Q3KNT7 163 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 HSD17B12Q53GQ0 312 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 FBLN7Q53RD9 439 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 C9orf152Q5JTZ5 239 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 SYT6Q5T7P8 510 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-213ENST00000527897 GLT8D1Q68CQ7 371 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 ZNF497Q6ZNH5 498 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 OR56B4Q8NH76 319 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 UQCC2Q9BRT2 126 aa12.44□□□□□ -0.42
CAPN1-213ENST00000527897 OOSP1A8MZH6 123 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 CD28P10747 220 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 GP2P55259 537 aaKnown RBP12.43□□□□□ -0.42
CAPN1-213ENST00000527897 DEFA6Q01524 100 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 DIAPH2-AS1Q14236 149 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 IRF3Q14653 427 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 ABCA11PQ4W5N1 156 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 NKAPLQ5M9Q1 402 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 OR10K2Q6IF99 312 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 FAM53AQ6NSI3 398 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-213ENST00000527897 LRRTM1Q86UE6 522 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 Q8N2B8 174 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 OR10A7Q8NGE5 316 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 CYYR1Q96J86 154 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 Q96M66 194 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 CST11Q9H112 138 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 LINC00574Q9H8X3 128 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 LIN7BQ9HAP6 207 aa12.43□□□□□ -0.42
CAPN1-213ENST00000527897 RCC2Q9P258 522 aaKnown RBP12.43□□□□□ -0.42
CAPN1-213ENST00000527897 C15orf65H3BRN8 121 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 LPLP06858 475 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 SNRNP70P08621 437 aaKnown RBP12.42□□□□□ -0.42
CAPN1-213ENST00000527897 FAM106CPP0CH98 169 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 SRMP19623 302 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 FUT3P21217 361 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 CRHBPP24387 322 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 MAP2K4P45985 399 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 REG1BP48304 166 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 HSPA13P48723 471 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 RPS25P62851 125 aaKnown RBP12.42□□□□□ -0.42
CAPN1-213ENST00000527897 HNF4GQ14541 408 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 C16orf82Q7Z2V1 217 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 LYPD6Q86Y78 171 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 DRAM1Q8N682 238 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 CFHR4Q92496 578 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 RBM14Q96PK6 669 aaKnown RBP12.42□□□□□ -0.42
CAPN1-213ENST00000527897 KCNK15Q9H427 330 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 DUSP21Q9H596 190 aa12.42□□□□□ -0.42
CAPN1-213ENST00000527897 C12orf77C9JDV5 145 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 CCRL2O00421 344 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 SPINT2O43291 252 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 KCNAB3O43448 404 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 WIPF1O43516 503 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 ORC5O43913 435 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 OR2F2O95006 317 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 RCC1P18754 421 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms