RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NCBP2LA6PVI3 153 aaKnown RBP12.96□□□□□ -0.33
USP47-207ENST00000527733 B3GALNT1O75752 331 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 INHBBP09529 407 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 VDAC1P21796 283 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 RAB32Q13637 225 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 ZBTB34Q8NCN2 500 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 PRSS33Q8NF86 280 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 DHRS9Q9BPW9 319 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 PRELID1Q9Y255 219 aa12.96□□□□□ -0.33
USP47-207ENST00000527733 KIAA1671Q9BY89 1806 aa12.96□□□□□ -0.34
USP47-207ENST00000527733 SMPD2O60906 423 aa12.96□□□□□ -0.34
USP47-207ENST00000527733 LINC01560Q8TB33 94 aa12.96□□□□□ -0.34
USP47-207ENST00000527733 Q96M66 194 aa12.96□□□□□ -0.34
USP47-207ENST00000527733 PARP12Q9H0J9 701 aaKnown RBP12.96□□□□□ -0.34
USP47-207ENST00000527733 V9GYS6 101 aa12.96□□□□□ -0.34
USP47-207ENST00000527733 TDGF1P13385 188 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 TPRX1Q8N7U7 411 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
USP47-207ENST00000527733 RPS10P5Q9NQ39 176 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 BCL2L11O43521 198 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 YIF1AO95070 293 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 MPC2O95563 127 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 COX6B1P14854 86 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 CD40P25942 277 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 OR5P3Q8WZ94 311 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 MARC2Q969Z3 335 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 SNX22Q96L94 193 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 ZNF629Q9UEG4 869 aaPredicted RBP12.95□□□□□ -0.34
USP47-207ENST00000527733 POLEQ07864 2286 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 A0A1B0GTI1 187 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 GYPAP02724 150 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 MPV17P39210 176 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 PIP4P1Q86T03 277 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 NUDT16L1Q9BRJ7 211 aaKnown RBP12.95□□□□□ -0.34
USP47-207ENST00000527733 DLL3Q9NYJ7 618 aa12.95□□□□□ -0.34
USP47-207ENST00000527733 HPXP02790 462 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 ACKR3P25106 362 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 RPS11P62280 158 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP47-207ENST00000527733 H3F3AP84243 136 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 MARS2Q96GW9 593 aaKnown RBP12.94□□□□□ -0.34
USP47-207ENST00000527733 POM121Q96HA1 1249 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 KRBOX1C9JBD0 128 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 SNAPINO95295 136 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 CRYZL1O95825 349 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 NAT2P11245 290 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 SOHLH1Q5JUK2 328 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 VSTM2AQ8TAG5 236 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 ALX4Q9H161 411 aaPredicted RBP12.94□□□□□ -0.34
USP47-207ENST00000527733 FKBP11Q9NYL4 201 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 KIF26AQ9ULI4 1882 aaPredicted RBP12.94□□□□□ -0.34
USP47-207ENST00000527733 NDUFA2O43678 99 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 SEZ6L2Q6UXD5 910 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 AQP3Q92482 292 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 RHOFQ9HBH0 211 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 PSMB3P49720 205 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 IL24Q13007 206 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 ZNF680Q8NEM1 530 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 OR4D10Q8NGI6 311 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 ST8SIA2Q92186 375 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 HSD17B10Q99714 261 aaKnown RBP12.94□□□□□ -0.34
USP47-207ENST00000527733 SOX7Q9BT81 388 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
USP47-207ENST00000527733 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 IGHV2OR16-5A0A0B4J2B6 119 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 B9A039 149 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 J3QRE1 110 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 NPBWR2P48146 333 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 THBS3P49746 956 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 TGIF2LYQ8IUE0 185 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 TGIF2LXQ8IUE1 241 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 SVBPQ8N300 66 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 NTNG2Q96CW9 530 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 CEP350Q5VT06 3117 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 F6UZH7 168 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 CLDN14O95500 239 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 MBP02144 154 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 FGF2P09038 288 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 ZNF14P17017 642 aaPredicted RBP12.93□□□□□ -0.34
USP47-207ENST00000527733 PPP1CCP36873 323 aaKnown RBP12.93□□□□□ -0.34
USP47-207ENST00000527733 PRSS54Q6PEW0 395 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 MUC15Q8N387 334 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 PPP1R14DQ9NXH3 145 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 CACNA1DQ01668 2161 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 MYO7BQ6PIF6 2116 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 A0A1W2PRD5 423 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 A0A1W2PRF3 423 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 A0A1W2PRM7 423 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 ZFP92A6NM28 416 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 COX5AP20674 150 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 Q6ZS92 163 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 ZDHHC11Q9H8X9 412 aa12.93□□□□□ -0.34
USP47-207ENST00000527733 SCMH1Q96GD3 660 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 SLC25A32Q9H2D1 315 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 ACOT6Q3I5F7 207 aaPredicted RBP12.92□□□□□ -0.34
USP47-207ENST00000527733 UBAC2Q8NBM4 344 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 MITD1Q8WV92 249 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 R3HDM4Q96D70 268 aa12.92□□□□□ -0.34
USP47-207ENST00000527733 SNRNP40Q96DI7 357 aaKnown RBP12.92□□□□□ -0.34
USP47-207ENST00000527733 GNB4Q9HAV0 340 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms