RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 C17orf78Q8N4C9 275 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 GUCD1Q96NT3 240 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 SIGMAR1Q99720 223 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 VN1R3Q9BXE9 311 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 RBKSQ9H477 322 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 SDF2L1Q9HCN8 221 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 TMEM74BQ9NUR3 256 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 UBE2J1Q9Y385 318 aaPredicted RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 CACNA1CQ13936 2221 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 COL4A2P08572 1712 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 G3V3Y1 287 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 K7EQM0 130 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 ST8SIA3O43173 380 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 PITX3O75364 302 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 TOX4O94842 621 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 GPR75O95800 540 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 BGLAPP02818 100 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 SMIM10L1P0DMW3 83 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 GRNP28799 593 aaKnown RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 ZNF93P35789 620 aaPredicted RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 TMEM50BP56557 158 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 SMAGPQ0VAQ4 97 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 UNQ5815/PRO19632Q6UWF5 114 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 GLIPR1L1Q6UWM5 242 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 LRP11Q86VZ4 500 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 ZNF440Q8IYI8 595 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 SMIM10Q96HG1 83 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 ARHGAP5-AS1Q96IT6 56 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 GPR35Q9HC97 309 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 PTRH2Q9Y3E5 179 aaKnown RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 LOC101059948A0A1B0GTJ6 334 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 PRSS37A4D1T9 235 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 OR5B21A6NL26 309 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 PRR33A8MZF0 331 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 M0QXV9 152 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 SOX1O00570 391 aaPredicted RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 SLC16A7O60669 478 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 PRNPP04156 253 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 CEACAM5P06731 702 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 PFN1P07737 140 aaKnown RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 ASCL1P50553 236 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 FAM3BP58499 235 aaPredicted RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 TLE3Q04726 772 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 EGR4Q05215 589 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 ACOT6Q3I5F7 207 aaPredicted RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 LINC01559Q495D7 138 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 C5orf47Q569G3 176 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 DPPA3Q6W0C5 159 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 SYT13Q7L8C5 426 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 ERASQ7Z444 233 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 FBXL14Q8N1E6 418 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 OR2AJ1Q8NGZ0 328 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 KCNG3Q8TAE7 436 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 GPR119Q8TDV5 335 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 RNF133Q8WVZ7 376 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 SCARF2Q96GP6 870 aaPredicted RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 TMEM59Q9BXS4 323 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 SLC46A2Q9BY10 475 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 MRPS28Q9Y2Q9 187 aaKnown RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 IGLV1-36A0A0B4J1U3 117 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 ZNF732B4DXR9 585 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 SPRY1O43609 319 aaPredicted RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 ESDP10768 282 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 HIST1H3AP68431 136 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 TMEM183BQ1AE95 376 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 TCTN1Q2MV58 587 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 TDRG1Q3Y452 100 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 SPIN3Q5JUX0 258 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 WDR82Q6UXN9 313 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 UBALD2Q8IYN6 164 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 OR8I2Q8N0Y5 310 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 TMEM52Q8NDY8 209 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 OR5D14Q8NGL3 314 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 IRF7Q92985 503 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 ADAT3Q96EY9 351 aaPredicted RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 TBX15Q96SF7 602 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 S1PR5Q9H228 398 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 BANF2Q9H503 90 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 WDR54Q9H977 334 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 CALHM2Q9HA72 323 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 LYRM4Q9HD34 91 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 CISD1Q9NZ45 108 aaKnown RBP6.49□□□□□ -1.37
SOX6-208ENST00000527619 TBX21Q9UL17 535 aa6.49□□□□□ -1.37
SOX6-208ENST00000527619 GAGE12BA1L429 117 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 HIDE1A8MVS5 230 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 FOXS1O43638 330 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 CD55P08174 381 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 CEACAM1P13688 526 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 TMEM187Q14656 261 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 TMEM52BQ4KMG9 183 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 ACTL10Q5JWF8 245 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 WDR25Q64LD2 544 aaPredicted RBP6.48□□□□□ -1.37
SOX6-208ENST00000527619 INO80CQ6PI98 192 aaPredicted RBP6.48□□□□□ -1.37
SOX6-208ENST00000527619 Q6ZVH6 145 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 C16orf82Q7Z2V1 217 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 LYZL2Q7Z4W2 148 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 TMEM123Q8N131 208 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 SLC38A9Q8NBW4 561 aa6.48□□□□□ -1.37
SOX6-208ENST00000527619 PTPMT1Q8WUK0 201 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms