RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 WNT1P04628 370 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 WNT5AP41221 380 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 LGALS7P47929 136 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 CSNK1DP48730 415 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 RIPPLY3P57055 190 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 COX20Q5RI15 118 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 ACSM5Q6NUN0 579 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 OR4D9Q8NGE8 314 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 ASB5Q8WWX0 329 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 C1QTNF6Q9BXI9 259 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 C20orf27Q9GZN8 174 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 GLIPR2Q9H4G4 154 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 EDA2RQ9HAV5 297 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 FGF20Q9NP95 211 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-216ENST00000527467 TAAR3PQ9P1P4 343 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 POLR2AP24928 1970 aaKnown RBP6.4□□□□□ -1.38
CTNND1-216ENST00000527467 MYH8P13535 1937 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 TRBV7-9A0A0J9YWB2 115 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 H0Y8X5 98 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 NGFP01138 241 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 GABRG2P18507 467 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 CA6P23280 308 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 FCARP24071 287 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 POLR2GP62487 172 aaKnown RBP eCLIP6.4□□□□□ -1.38
CTNND1-216ENST00000527467 ZNF124Q15973 351 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 NR2C2APQ86WQ0 139 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 FAM219AQ8IW50 185 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 AICDAQ9GZX7 198 aa6.4□□□□□ -1.38
CTNND1-216ENST00000527467 AMMECR1Q9Y4X0 333 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-216ENST00000527467 URB1O60287 2271 aaKnown RBP6.4□□□□□ -1.38
CTNND1-216ENST00000527467 NPIPB8E9PQR5 432 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 NPIPB9F8W1W9 429 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 NPIPB7O75200 414 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 TMEM50AO95807 157 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 SEC11BP0C7V7 166 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 TNFRSF1AP19438 455 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 MDKP21741 143 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-216ENST00000527467 CYB561P49447 251 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 HIST1H1AQ02539 215 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-216ENST00000527467 MRGPREQ86SM8 312 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 FBXL14Q8N1E6 418 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 OR10AC1Q8NH08 325 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 PHLDA1Q8WV24 401 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-216ENST00000527467 DHCR7Q9UBM7 475 aaKnown RBP6.4□□□□□ -1.39
CTNND1-216ENST00000527467 TINAGQ9UJW2 476 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 A0A1B0GW15 77 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 LDLRAD4O15165 306 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 PSMB5P28074 263 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 CD68P34810 354 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-216ENST00000527467 CLDN2P57739 230 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 DEGS2Q6QHC5 323 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 NHLRC1Q6VVB1 395 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 TCF24Q7RTU0 167 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 OR4X1Q8NH49 305 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 RASL11BQ9BPW5 248 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 MARVELD1Q9BSK0 173 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 RSPO3Q9BXY4 272 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-216ENST00000527467 C6orf106Q9H6K1 298 aaPredicted RBP6.4□□□□□ -1.39
CTNND1-216ENST00000527467 PROCRQ9UNN8 238 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 LTBP1Q14766 1721 aa6.4□□□□□ -1.39
CTNND1-216ENST00000527467 TRGV8A0A0C4DH27 118 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 SERTM1A2A2V5 107 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 PRSS37A4D1T9 235 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 SPRY1O43609 319 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-216ENST00000527467 SLC25A20O43772 301 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 CEACAM3P40198 252 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 SLC48A1Q6P1K1 146 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 C20orf196Q8IYI0 205 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 PIANPQ8IYJ0 282 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 NPWQ8N729 165 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 KIR3DL3Q8N743 410 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 ST6GALNAC3Q8NDV1 305 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 TXNDC17Q9BRA2 123 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 MYOZ1Q9NP98 299 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-216ENST00000527467 ELOVL5Q9NYP7 299 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 A0A1W2PQM1 296 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 AMY1AP04745 511 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 FAM157BP0CG42 384 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 CD70P32970 193 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 GFRA1P56159 465 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
CTNND1-216ENST00000527467 PITX1P78337 314 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-216ENST00000527467 LINC00696Q6ZRV3 163 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 SH2D5Q6ZV89 423 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 NUDT8Q8WV74 236 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 TNFRSF14Q92956 283 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 WDFY2Q96P53 400 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 PRR14Q9BWN1 585 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 MRPL18Q9H0U6 180 aaKnown RBP6.39□□□□□ -1.39
CTNND1-216ENST00000527467 KCNE5Q9UJ90 142 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 TRAV8-6A0A0B4J262 113 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 M0R1B8 84 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 SIGLEC5O15389 551 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 EIF3GO75821 320 aaKnown RBP eCLIP6.39□□□□□ -1.39
CTNND1-216ENST00000527467 MMP16P51512 607 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 SCAND1P57086 179 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 AQP6Q13520 282 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-216ENST00000527467 PRNTQ86SH4 94 aa6.39□□□□□ -1.39
CTNND1-216ENST00000527467 TM4SF18Q96CE8 201 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms