RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 KNG1P01042 644 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 CTSDP07339 412 aaPredicted RBP13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 FLI1Q01543 452 aaPredicted RBP13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 C11orf53Q8IXP5 236 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 NARS2Q96I59 477 aaKnown RBP13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 C2orf50Q96LR7 162 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 RNF126Q9BV68 326 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 TRDCB7Z8K6 153 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 H7C1Q1 480 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 OR2H2O95918 312 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 ZNF728P0DKX0 622 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 MDH2P40926 338 aaKnown RBP13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 PRAMEF6Q5VXH4 476 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 CLEC18BQ6UXF7 455 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 LRP11Q86VZ4 500 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 OR1S2Q8NGQ3 325 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 TMEM171Q8WVE6 324 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 SAT2Q96F10 170 aaPredicted RBP13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 HES4Q9HCC6 221 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 MMP26Q9NRE1 261 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 ATP23Q9Y6H3 246 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 ZGRF1Q86YA3 2104 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 SPTBN4Q9H254 2564 aa13.71□□□□□ -0.21
SNRNP35-204ENST00000527158 TRBV6-6A0A0A6YYG2 114 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 SIRPB1O00241 398 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 PTAFRP25105 342 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 SLC9A3R2Q15599 337 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 MSMPQ1L6U9 139 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 UNQ6494/PRO21346Q6UXR6 183 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 ZNF826PQ6ZT77 177 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 ZCCHC14Q8WYQ9 949 aaKnown RBP13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 TOMM40LQ969M1 308 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 TSNAXQ99598 290 aaKnown RBP13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 SYT3Q9BQG1 590 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 LIME1Q9H400 295 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 UFSP2Q9NUQ7 469 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 TREM2Q9NZC2 230 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 NDRG3Q9UGV2 375 aa13.71□□□□□ -0.22
SNRNP35-204ENST00000527158 RP1L1Q8IWN7 2480 aaPredicted RBP13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 ESPL1Q14674 2120 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 PRR14LQ5THK1 2151 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 SLC33A1O00400 549 aaPredicted RBP13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 TK1P04183 234 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 CTXN2P0C2S0 81 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 FXYD4P59646 89 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 HERV-K104P61576 105 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 IGSF11Q5DX21 431 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 C10orf91Q5T1B1 145 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 ATRAIDQ6UW56 229 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 WDR82Q6UXN9 313 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 WFDC8Q8IUA0 241 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 MRPL30Q8TCC3 161 aaKnown RBP13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 CARHSP1Q9Y2V2 147 aaKnown RBP13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 IGF2RP11717 2491 aa13.7□□□□□ -0.22
SNRNP35-204ENST00000527158 IGLV3-9A0A075B6K5 115 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 ZNF205O95201 554 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 H2AFB1P0C5Y9 115 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 CD200P41217 278 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 SUPT4H1P63272 117 aaKnown RBP13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 ABCA11PQ4W5N1 156 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 SGPP2Q8IWX5 399 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 SPAG16Q8N0X2 631 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 ST6GALNAC3Q8NDV1 305 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 HEATR1Q9H583 2144 aaKnown RBP13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 DIRAS3O95661 229 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 HAND1O96004 215 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 SCTP09683 121 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 UCP3P55916 312 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 SHEQ5VZ18 495 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 MOB3AQ96BX8 217 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 CNTNAP3BQ96NU0 1288 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 METTL8Q9H825 291 aaKnown RBP13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 C1orf123Q9NWV4 160 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 OR14J1Q9UGF5 321 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 BSNQ9UPA5 3926 aa13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 DSPP15924 2871 aaKnown RBP13.69□□□□□ -0.22
SNRNP35-204ENST00000527158 IFNA2P01563 188 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 SFTPCP11686 197 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 CA7P43166 264 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 ACP7Q6ZNF0 438 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 NUP37Q8NFH4 326 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 TAAR3PQ9P1P4 343 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 WNT9BO14905 357 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 PPYP01298 95 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 AADACP22760 399 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 SMIM21Q3B7S5 101 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 C20orf204Q6ZNR8 217 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 KCNIP3Q9Y2W7 256 aa13.68□□□□□ -0.22
SNRNP35-204ENST00000527158 SNAPINO95295 136 aa13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 RPS2P15880 293 aaKnown RBP13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 RBMXP38159 391 aaKnown RBP13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 PIGPP57054 158 aa13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 ZNF880Q6PDB4 577 aa13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 MOB1BQ7L9L4 216 aa13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 SEC11CQ9BY50 192 aa13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 MRPL37Q9BZE1 423 aaKnown RBP13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 NGBQ9NPG2 151 aa13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 LPAR3Q9UBY5 353 aa13.67□□□□□ -0.22
SNRNP35-204ENST00000527158 PRELID3BQ9Y3B1 194 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms