RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 PRAMEF6Q5VXH4 476 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 C11orf87Q6NUJ2 197 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 SGPP2Q8IWX5 399 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 MRPL30Q8TCC3 161 aaKnown RBP15.87■□□□□ 0.13
VPS28-207ENST00000526977 ERGIC1Q969X5 290 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 MOB3AQ96BX8 217 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 FBXO9Q9UK97 447 aaPredicted RBP15.87■□□□□ 0.13
VPS28-207ENST00000526977 ZNF44P15621 663 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 RPA2P15927 270 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 AADACP22760 399 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 CFHR2P36980 270 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 GLP1RP43220 463 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 UCP3P55916 312 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 PIGPP57054 158 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 RBM39Q14498 530 aaKnown RBP15.87■□□□□ 0.13
VPS28-207ENST00000526977 SWI5Q1ZZU3 235 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 LRRC37A5PQ49AS3 106 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 MFFQ9GZY8 342 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 DYNLRB1Q9NP97 96 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 UFSP2Q9NUQ7 469 aa15.87■□□□□ 0.13
VPS28-207ENST00000526977 ICE1Q9Y2F5 2266 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 FLNCQ14315 2725 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 TRBV6-6A0A0A6YYG2 114 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 TEX13DA0A0J9YY54 714 aaPredicted RBP15.86■□□□□ 0.13
VPS28-207ENST00000526977 A6NNC1 897 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 TRDCB7Z8K6 153 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 IFNA7P01567 189 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 TNFRSF1AP19438 455 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 WDR82Q6UXN9 313 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 POC1AQ8NBT0 407 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 ITLN1Q8WWA0 313 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 NMES1Q9C002 83 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 C1orf123Q9NWV4 160 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 RDH8Q9NYR8 311 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 UBR5O95071 2799 aaPredicted RBP15.86■□□□□ 0.13
VPS28-207ENST00000526977 ROS1P08922 2347 aa15.86■□□□□ 0.13
VPS28-207ENST00000526977 MPTX1A8MV57 137 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 NXPH2O95156 264 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 ZNF146Q15072 292 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 C6orf183Q5T699 404 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 OR8H3Q8N146 312 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 OR10Z1Q8NGY1 313 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 EGLN1Q9GZT9 426 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 ARL6Q9H0F7 186 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 KIR2DS1A0A191URI9 304 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 ANKRD34BA5PLL1 514 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 OR2H2O95918 312 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 PPYP01298 95 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 KIR2DS4P43632 304 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 CYCSP99999 105 aaKnown RBP15.85■□□□□ 0.13
VPS28-207ENST00000526977 KIR2DS1Q14954 304 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 HERPUD1Q15011 391 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 TESK1Q15569 626 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 ZNF880Q6PDB4 577 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 ZNF826PQ6ZT77 177 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 RSRP1Q9BUV0 290 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 METTL8Q9H825 291 aaKnown RBP15.85■□□□□ 0.13
VPS28-207ENST00000526977 HES4Q9HCC6 221 aa15.85■□□□□ 0.13
VPS28-207ENST00000526977 IGKV1-6A0A0C4DH72 117 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 hCG_1807616A0A1W2PRN6 198 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 SLC33A1O00400 549 aaPredicted RBP15.84■□□□□ 0.13
VPS28-207ENST00000526977 PSMB6P28072 239 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 RBMXP38159 391 aaKnown RBP15.84■□□□□ 0.13
VPS28-207ENST00000526977 ABCA11PQ4W5N1 156 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 SLC38A6Q8IZM9 456 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 OR10C1Q96KK4 312 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 TNFSF18Q9UNG2 199 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 USP9XQ93008 2570 aaPredicted RBP15.84■□□□□ 0.13
VPS28-207ENST00000526977 SIRPB1O00241 398 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 BET1O15155 118 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 TK1P04183 234 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 PLA2G2AP14555 144 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 RCC1P18754 421 aaPredicted RBP15.84■□□□□ 0.13
VPS28-207ENST00000526977 HERV-K104P61576 105 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 CCL8P80075 99 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 PHLDA2Q53GA4 152 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 FIP1L1Q6UN15 594 aaKnown RBP15.84■□□□□ 0.13
VPS28-207ENST00000526977 OR5T2Q8NGG2 359 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 RTN4IP1Q8WWV3 396 aaPredicted RBP15.84■□□□□ 0.13
VPS28-207ENST00000526977 GCM1Q9NP62 436 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 RASL12Q9NYN1 266 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 UBQLN2Q9UHD9 624 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 KCNIP3Q9Y2W7 256 aa15.84■□□□□ 0.13
VPS28-207ENST00000526977 J3QKU1 62 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 SH2D1BO14796 132 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 HOXB5P09067 269 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 CTXN2P0C2S0 81 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 AP2S1P53680 142 aaPredicted RBP15.83■□□□□ 0.12
VPS28-207ENST00000526977 PAN3Q58A45 887 aaKnown RBP15.83■□□□□ 0.12
VPS28-207ENST00000526977 MOGAT3Q86VF5 341 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 Q8TCH9 128 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 NAA60Q9H7X0 242 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 SLC2A9Q9NRM0 540 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 CBLN4Q9NTU7 201 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 TREM2Q9NZC2 230 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 MAB21L2Q9Y586 359 aa15.83■□□□□ 0.12
VPS28-207ENST00000526977 ABCA4P78363 2273 aa15.82■□□□□ 0.12
VPS28-207ENST00000526977 CLEC18AA5D8T8 446 aa15.82■□□□□ 0.12
VPS28-207ENST00000526977 SP6Q3SY56 376 aa15.82■□□□□ 0.12
VPS28-207ENST00000526977 SPRNQ5BIV9 151 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms