RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 LOC102724200A0A096LPH7 203 aaPredicted RBP2.47□□□□□ -2.01
CD44-223ENST00000526553 A0A1B0GX12 115 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 CD300LBA8K4G0 201 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 CALUO43852 315 aaPredicted RBP2.47□□□□□ -2.01
CD44-223ENST00000526553 OR7C2O60412 319 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 CDK14O94921 469 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 OR2A4O95047 310 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 MPZL1O95297 269 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 TNFAIP8O95379 198 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 SNAP29O95721 258 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 IGKV1-17P01599 117 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 NUDT2P50583 147 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 BNIP2Q12982 314 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 PMS2P3Q13401 168 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 LINC00303Q3SY05 128 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 ZNF404Q494X3 552 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 ZNF880Q6PDB4 577 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 SLC35G3Q8N808 338 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 OR8A1Q8NGG7 326 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 OR5AK3PQ8NH89 298 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 C22orf15Q8WYQ4 148 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 ESR2Q92731 530 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 CPNE4Q96A23 557 aaPredicted RBP2.47□□□□□ -2.01
CD44-223ENST00000526553 LINC00477Q96M19 166 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 OR2A7Q96R45 310 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 ZNF251Q9BRH9 671 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 BBS2Q9BXC9 721 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 SRRQ9GZT4 340 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 NRBP2Q9NSY0 501 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 SNX24Q9Y343 169 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 SZT2Q5T011 3432 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 PSME4Q14997 1843 aa2.47□□□□□ -2.01
CD44-223ENST00000526553 ABCB11O95342 1321 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 IGLV2-18A0A075B6J9 118 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 TRAV40A0A0B4J280 105 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 LOC389332A0A1B0GUA5 103 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 SULT1C2O00338 296 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 GP1BAP07359 652 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 ELK4P28324 431 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 MPV17P39210 176 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 CCL23P55773 120 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 PRKCDQ05655 676 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 ATP5G2Q06055 141 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 Q499Y3 187 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 HSP90B2PQ58FF3 399 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 LAMTOR1Q6IAA8 161 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 PRSS54Q6PEW0 395 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 TRMT10CQ7L0Y3 403 aaKnown RBP2.46□□□□□ -2.02
CD44-223ENST00000526553 HMGN2P46Q86SG4 172 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 ZNF101Q8IZC7 436 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 FAM45AQ8TCE6 357 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 OR5P2Q8WZ92 322 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 GPR82Q96P67 336 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 C1orf50Q9BV19 199 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 SUCNR1Q9BXA5 334 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 ANGPTL4Q9BY76 406 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 ING2Q9H160 280 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 FBXO6Q9NRD1 293 aaPredicted RBP2.46□□□□□ -2.02
CD44-223ENST00000526553 IL37Q9NZH6 218 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 SLC22A14Q9Y267 594 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 KLF13Q9Y2Y9 288 aaPredicted RBP2.46□□□□□ -2.02
CD44-223ENST00000526553 ZSWIM8A7E2V4 1837 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 COL6A3P12111 3177 aa2.46□□□□□ -2.02
CD44-223ENST00000526553 MGAMO43451 1857 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 ECM29Q5VYK3 1845 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 IGLV3-12A0A075B6K2 115 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 PGPA6NDG6 321 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 COLCA2A8K830 154 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 I3L4J1 428 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 RBBP9O75884 186 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 RCBTB2O95199 551 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 BRI3O95415 125 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 CECR9P0C854 216 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 OCMP0CE72 109 aaPredicted RBP2.45□□□□□ -2.02
CD44-223ENST00000526553 SLC2A1P11166 492 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 PRTN3P24158 256 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 RPS12P25398 132 aaKnown RBP2.45□□□□□ -2.02
CD44-223ENST00000526553 PSMB6P28072 239 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 TEAD1P28347 426 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 PLTPP55058 493 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 AQP5P55064 265 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 RAB31Q13636 194 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 FAM104BQ5XKR9 115 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 FAM183BPQ6ZVS7 135 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 PDPNQ86YL7 162 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 LINC00337Q8N6G1 96 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 APCDD1LQ8NCL9 501 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 OR5H2Q8NGV7 314 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 OR2AE1Q8NHA4 323 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 ZNF420Q8TAQ5 688 aaPredicted RBP2.45□□□□□ -2.02
CD44-223ENST00000526553 FAM57AQ8TBR7 257 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 CCDC127Q96BQ5 260 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 YIPF6Q96EC8 236 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 YPEL4Q96NS1 127 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 IP6K3Q96PC2 410 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 APOL4Q9BPW4 351 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 ZNF2Q9BSG1 426 aaPredicted RBP2.45□□□□□ -2.02
CD44-223ENST00000526553 MARVELD1Q9BSK0 173 aa2.45□□□□□ -2.02
CD44-223ENST00000526553 ZNF717Q9BY31 904 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms