RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 BLNKQ8WV28 456 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 PYDC1Q8WXC3 89 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM234Q8WY98 164 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 RBPMSQ93062 196 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 CPNE4Q96A23 557 aaPredicted RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 DDIT4LQ96D03 193 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 DCUN1D1Q96GG9 259 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 SMIM8Q96KF7 97 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 PACRGQ96M98 296 aaPredicted RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 AP1S3Q96PC3 154 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 QKIQ96PU8 341 aaKnown RBP eCLIP0.79□□□□□ -2.283e-7■■■■■ 26.9
ECHDC1-219ENST00000526299 METTL26Q96S19 204 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 LINC01587Q99440 93 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 STACQ99469 402 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 SERPINI1Q99574 410 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 TBX5Q99593 518 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 GPR22Q99680 433 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 RNF5Q99942 180 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 DHRS9Q9BPW9 319 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 VPS25Q9BRG1 176 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 FAAP24Q9BTP7 215 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM243Q9BU79 118 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF426Q9BUY5 554 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 CDCA4Q9BXL8 241 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 MRPL20Q9BYC9 149 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 PARD6GQ9BYG4 376 aaPredicted RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 POTEKPQ9BYX7 375 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 TRIM4Q9C037 500 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 NXF2Q9GZY0 626 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 COA1Q9GZY4 146 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 TXNIPQ9H3M7 391 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 MAP1LC3AQ9H492 121 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 C11orf49Q9H6J7 331 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 UCK1Q9HA47 277 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 CACYBPQ9HB71 228 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM138Q9NPI0 162 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 ACOT13Q9NPJ3 140 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 DIABLOQ9NR28 239 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 INIPQ9NRY2 104 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 SPANXB1Q9NS25 103 aaPredicted RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 KCNIP2Q9NS61 270 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 PLEKHJ1Q9NW61 149 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 C21orf62Q9NYP8 219 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 STMN3Q9NZ72 180 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 GLTPQ9NZD2 209 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 MED11Q9P086 117 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 GLS2Q9UI32 602 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 NAGKQ9UJ70 344 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 ANXA10Q9UJ72 324 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 DNAJC12Q9UKB3 198 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 BTRCQ9Y297 605 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 SIGLEC9Q9Y336 463 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 SNX24Q9Y343 169 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 HDGFL3Q9Y3E1 203 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 TBL2Q9Y4P3 447 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 PUS1Q9Y606 427 aaKnown RBP eCLIP0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 USH1CQ9Y6N9 552 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 S4R3C0 116 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF532Q9HCE3 1301 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 INSRP06213 1382 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 ANKRD30AQ9BXX3 1397 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 SHROOM3Q8TF72 1996 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 WDR62O43379 1518 aa0.79□□□□□ -2.28
ECHDC1-219ENST00000526299 IGHV3-72A0A0B4J1Y9 119 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 TRAV8-6A0A0B4J262 113 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 A0A1W2PQL4 384 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 RBFOX3A6NFN3 312 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF98A6NK75 572 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 CD300LBA8K4G0 201 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 A8MUU9 505 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 EVPLLA8MZ36 301 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 B4DEV8 164 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 DISC1C4P0D8 188 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 FTCDNL1E5RQL4 147 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 F5H768 121 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 F8VP50 259 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 J3QLI3 93 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 M0R1X1 148 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 GPR171O14626 319 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 UBE2L6O14933 153 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 BIRC5O15392 142 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF207O43670 478 aaKnown RBP0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 OR7C2O60412 319 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 GMDSO60547 372 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 SERPINB7O75635 380 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 DCTN3O75935 186 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 ATG12O94817 140 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 NSA2O95478 260 aaKnown RBP0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 MT-CO2P00403 227 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 HBZP02008 142 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 ORM1P02763 201 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 ISG15P05161 165 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 IGKV5-2P06315 115 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 OR4Q2P0C623 313 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 LIMS3P0CW19 117 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 LIMS4P0CW20 117 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 SMIM17P0DL12 118 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 THRAP10827 490 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 PSKH1P11801 424 aa0.78□□□□□ -2.28
ECHDC1-219ENST00000526299 CD79AP11912 226 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 228.4 ms