RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 NKAPLQ5M9Q1 402 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 LIPKQ5VXJ0 399 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 XAF1Q6GPH4 301 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 SERPINA12Q8IW75 414 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 DRAM1Q8N682 238 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 DNAAF1Q8NEP3 725 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 OR51D1Q8NGF3 324 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 OR4D6Q8NGJ1 314 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 OR5D18Q8NGL1 313 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 OR13C3Q8NGS6 347 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 OR56B4Q8NH76 319 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 ZNF596Q8TC21 504 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 TSEN15Q8WW01 171 aaKnown RBP5.2□□□□□ -1.58
CD44-221ENST00000526000 FGGYQ96C11 551 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 ADAT3Q96EY9 351 aaPredicted RBP5.2□□□□□ -1.58
CD44-221ENST00000526000 RAX2Q96IS3 184 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 PDCD1LG2Q9BQ51 273 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 BCL7BQ9BQE9 202 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 UBE2J1Q9Y385 318 aaPredicted RBP5.2□□□□□ -1.58
CD44-221ENST00000526000 TRBV5-7A0A0A0MS05 114 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 IGKV1-9A0A0C4DH69 117 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 IGKV1-12A0A0C4DH73 117 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 TRDV1A0A1B0GX56 115 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 NCBP2LA6PVI3 153 aaKnown RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 LY6LH3BQJ8 138 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 CCL24O00175 119 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 DEGS1O15121 323 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 MAGEB3O15480 346 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 TMEM127O75204 238 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 SC5DO75845 299 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 CYB5AP00167 134 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 IGKV1D-12P01611 117 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 RPLP1P05386 114 aaKnown RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 UCHL1P09936 223 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 OCMP0CE72 109 aaPredicted RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 FAM106CPP0CH98 169 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 TMEM11P17152 192 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 ATF1P18846 271 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 RAB3AP20336 220 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 FGF9P31371 208 aaPredicted RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 RPL5P46777 297 aaKnown RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 REG1BP48304 166 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 GNG10P50151 68 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 RPS11P62280 158 aaKnown RBP eCLIP5.19□□□□□ -1.58
CD44-221ENST00000526000 PPP3R1P63098 170 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 DOC2BQ14184 412 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 ATXN7L3Q14CW9 347 aaPredicted RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 NEDD8Q15843 81 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 C17orf58Q2M2W7 97 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 HLA-DRB5Q30154 266 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 KRBOX4Q5JUW0 171 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 OR52W1Q6IF63 320 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 FAM53AQ6NSI3 398 aaPredicted RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 ZNF529Q6P280 563 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 CD200R1LQ6Q8B3 271 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 LHFPL2Q6ZUX7 228 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 OVCH2Q7RTZ1 564 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 C16orf82Q7Z2V1 217 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 MOB3BQ86TA1 216 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 RTN4RL2Q86UN3 420 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 NKAIN3Q8N8D7 197 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 UBALD1Q8TB05 177 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 TMEM106AQ96A25 262 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 RPEQ96AT9 228 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 MCRIP2Q9BUT9 160 aaKnown RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 PPIL3Q9H2H8 161 aaKnown RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 ZCCHC4Q9H5U6 513 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 RHOFQ9HBH0 211 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 HMG20AQ9NP66 347 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 EXOSC4Q9NPD3 245 aaKnown RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 GLS2Q9UI32 602 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 STUB1Q9UNE7 303 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 MOB4Q9Y3A3 225 aa5.19□□□□□ -1.58
CD44-221ENST00000526000 SIRT4Q9Y6E7 314 aaPredicted RBP5.19□□□□□ -1.58
CD44-221ENST00000526000 KMT2CQ8NEZ4 4911 aaKnown RBP5.18□□□□□ -1.58
CD44-221ENST00000526000 TRAV1-2A0A0B4J238 106 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 ODAMA1E959 279 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 SULT1B1O43704 296 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 IGKV1D-33P01593 117 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 IGKV1-33P01594 117 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 IGLV1-47P01700 117 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 NHLRC4P0CG21 123 aaPredicted RBP5.18□□□□□ -1.58
CD44-221ENST00000526000 SMIM18P0DKX4 95 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 TMEM225BP0DP42 221 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 ERP29P30040 261 aaKnown RBP5.18□□□□□ -1.58
CD44-221ENST00000526000 CEACAM3P40198 252 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 PTGFRP43088 359 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 GLP1RP43220 463 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 ALDH3B2P48448 385 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 RBP2P50120 134 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 ARHGDIBP52566 201 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 GP2P55259 537 aaKnown RBP5.18□□□□□ -1.58
CD44-221ENST00000526000 PDZK1IP1Q13113 114 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 SSX1Q16384 188 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 ACSM3Q53FZ2 586 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 HSD17B12Q53GQ0 312 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 ZFAND6Q6FIF0 208 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 Q6P435 159 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 HEPN1Q6WQI6 88 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 SLC35E3Q7Z769 313 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms