RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 ETV2O00321 342 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-202ENST00000524773 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
CAPN1-202ENST00000524773 HSPB1P04792 205 aaKnown RBP11.29□□□□□ -0.6
CAPN1-202ENST00000524773 CRYGSP22914 178 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 GPM6AP51674 278 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 NXPH1P58417 271 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 RTL6Q6ICC9 239 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 TGIF2LXQ8IUE1 241 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 C1orf87Q8N0U7 546 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 TMEM54Q969K7 222 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 SPSB1Q96BD6 273 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 PLK3Q9H4B4 646 aa11.29□□□□□ -0.6
CAPN1-202ENST00000524773 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
CAPN1-202ENST00000524773 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 ARGFXA6NJG6 315 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 SOX15O60248 233 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 CA11O75493 328 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 CNOT4O95628 575 aaKnown RBP11.28□□□□□ -0.6
CAPN1-202ENST00000524773 PSG2P11465 335 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 MSX1P28360 303 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 CASP6P55212 293 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 COL10A1Q03692 680 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 CNN3Q15417 329 aaKnown RBP11.28□□□□□ -0.6
CAPN1-202ENST00000524773 EXT1Q16394 746 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 GUSBP11Q6P575 273 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 LILRB2Q8N423 598 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 RDH5Q92781 318 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 RBKSQ9H477 322 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 A0A1B0GW64 132 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 ZIC3O60481 467 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 EIF3IQ13347 325 aaKnown RBP11.28□□□□□ -0.6
CAPN1-202ENST00000524773 REC114Q7Z4M0 266 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 FGF23Q9GZV9 251 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-202ENST00000524773 DKKL1Q9UK85 242 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 CDS2O95674 445 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 EDN3P14138 238 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 GLB1P16278 677 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 GZMHP20718 246 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 G0S2P27469 103 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 TLE4Q04727 773 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 C10orf128Q5T292 105 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 TMEM37Q8WXS4 190 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 GPR146Q96CH1 333 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 LAMP3Q9UQV4 416 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 CACNA1DQ01668 2161 aa11.28□□□□□ -0.6
CAPN1-202ENST00000524773 A0A087WWC5 75 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 ZNF732B4DXR9 585 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 TSTD3H0UI37 97 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 CYTIPO60759 359 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 AMBPP02760 352 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 TK1P04183 234 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 MLF1P58340 268 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 TAS2R30P59541 319 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 CEACAM16Q2WEN9 425 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 ZDHHC23Q8IYP9 409 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 ATP5SQ99766 215 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 OCIAD1Q9NX40 245 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 GZMBP10144 247 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 LHFPL2Q6ZUX7 228 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 STX12Q86Y82 276 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 ADPRHL1Q8NDY3 354 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 WASF3Q9UPY6 502 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 RNF115Q9Y4L5 304 aa11.27□□□□□ -0.61
CAPN1-202ENST00000524773 A0A1B0GU03 582 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 CLDN34H7C241 214 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 BCAT2O15382 392 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-202ENST00000524773 SLC31A2O15432 143 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 CD33P20138 364 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 COL8A2P25067 703 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 PKIAP61925 76 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 HIST1H3AP68431 136 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 ID3Q02535 119 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 FAM27BQ5VT28 67 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 FAM53AQ6NSI3 398 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-202ENST00000524773 SLC35E3Q7Z769 313 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 FADS6Q8N9I5 356 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 CPEB3Q8NE35 698 aaKnown RBP11.26□□□□□ -0.61
CAPN1-202ENST00000524773 PPP1R3CQ9UQK1 317 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 RPL36A-HNRNPH2H7BZ11 118 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 EREGO14944 169 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 BCL2P10415 239 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 EGR1P18146 543 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 HOXA4Q00056 320 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-202ENST00000524773 OR8G1Q15617 311 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 SP5Q6BEB4 398 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-202ENST00000524773 OR8G2PQ6IF36 304 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 TMPRSS7Q7RTY8 843 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 C16orf82Q7Z2V1 217 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 VASH2Q86V25 355 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 OR56B2PQ8NGI1 322 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 RCC1LQ96I51 464 aaKnown RBP11.26□□□□□ -0.61
CAPN1-202ENST00000524773 TMEM56Q96MV1 263 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 CDX2Q99626 313 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-202ENST00000524773 GPR87Q9BY21 358 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 WNT5BQ9H1J7 359 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 PROK2Q9HC23 129 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 Q9N2K0 584 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms