RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 PLPPR1Q8TBJ4 325 aa13.86□□□□□ -0.19
CCNC-213ENST00000523541 CAPSLQ8WWF8 208 aa13.86□□□□□ -0.19
CCNC-213ENST00000523541 CFHR4Q92496 578 aa13.86□□□□□ -0.19
CCNC-213ENST00000523541 MUL1Q969V5 352 aa13.86□□□□□ -0.19
CCNC-213ENST00000523541 KIAA2026Q5HYC2 2103 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 CMYA5Q8N3K9 4069 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 MEGF8Q7Z7M0 2845 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 MAGEA13PA6NCF6 341 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 KCNAB3O43448 404 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 TSPAN15O95858 294 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 MT-ND4P03905 459 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 CD37P11049 281 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 NFYBP25208 207 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 PSMA1P25786 263 aaKnown RBP13.85□□□□□ -0.19
CCNC-213ENST00000523541 MED22Q15528 200 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 GLT8D1Q68CQ7 371 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 BAIAP2L2Q6UXY1 529 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 ZNF497Q6ZNH5 498 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 C8orf31Q8N9H6 132 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 MRGPRDQ8TDS7 321 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 CST11Q9H112 138 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 ZNF702PQ9H963 129 aa13.85□□□□□ -0.19
CCNC-213ENST00000523541 VWFP04275 2813 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 M0QZK8 103 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 RGS10O43665 173 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 SC5DO75845 299 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 FAM106CPP0CH98 169 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 SRMP19623 302 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 FUT3P21217 361 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 MADCAM1Q13477 382 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 TPBGQ13641 420 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 TRAT1Q6PIZ9 186 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 PRSS48Q7RTY5 328 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 GAPTQ8N292 157 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 UFD1Q92890 307 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 OR5M11Q96RB7 305 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 SERTAD4Q9NUC0 356 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 PSG11Q9UQ72 335 aa13.84□□□□□ -0.19
CCNC-213ENST00000523541 OR2F2O95006 317 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 MGMTP16455 207 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 JUNBP17275 347 aaPredicted RBP13.83□□□□□ -0.2
CCNC-213ENST00000523541 CRHBPP24387 322 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 RAB7AP51149 207 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 RBM48Q5RL73 367 aaKnown RBP13.83□□□□□ -0.2
CCNC-213ENST00000523541 C1orf100Q5SVJ3 147 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 ZNF554Q86TJ5 538 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 OR8H3Q8N146 312 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 LINC00311Q8N616 119 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 NEK7Q8TDX7 302 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 RPEQ96AT9 228 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 RBM14Q96PK6 669 aaKnown RBP13.83□□□□□ -0.2
CCNC-213ENST00000523541 SELENOIQ9C0D9 397 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 BLOC1S6Q9UL45 172 aa13.83□□□□□ -0.2
CCNC-213ENST00000523541 TET2Q6N021 2002 aaPredicted RBP13.83□□□□□ -0.2
CCNC-213ENST00000523541 A0A1W2PP11 408 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 FAM90A9PA6NNJ1 464 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 C15orf65H3BRN8 121 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 CRTAPO75718 401 aaPredicted RBP13.82□□□□□ -0.2
CCNC-213ENST00000523541 UCHL1P09936 223 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 EMX1Q04741 257 aaPredicted RBP13.82□□□□□ -0.2
CCNC-213ENST00000523541 HABP2Q14520 560 aaPredicted RBP13.82□□□□□ -0.2
CCNC-213ENST00000523541 HSD17B12Q53GQ0 312 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 C6orf183Q5T699 404 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 STEAP3Q658P3 488 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 HIST2H2BDQ6DRA6 164 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 RAB12Q6IQ22 244 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 CEACAM19Q7Z692 300 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 RFESDQ8TAC1 157 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 ARL11Q969Q4 196 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 Q96M66 194 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 TMED9Q9BVK6 235 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 WNT10AQ9GZT5 417 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 ETAA1Q9NY74 926 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 RAB26Q9ULW5 256 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 LRRC42Q9Y546 428 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 PEX16Q9Y5Y5 336 aa13.82□□□□□ -0.2
CCNC-213ENST00000523541 AIPO00170 330 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 SPINT2O43291 252 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 ARL6IP5O75915 188 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 BPNT1O95861 308 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 SSTR5P35346 364 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 GP2P55259 537 aaKnown RBP13.81□□□□□ -0.2
CCNC-213ENST00000523541 BLCAPP62952 87 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 MLLT11Q13015 90 aaPredicted RBP13.81□□□□□ -0.2
CCNC-213ENST00000523541 LRRTM1Q86UE6 522 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 OR10X1Q8NGY0 326 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 KCNG3Q8TAE7 436 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 TOMM40LQ969M1 308 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 OCSTAMPQ9BR26 566 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 ZNF581Q9P0T4 197 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 TRAPPC2LQ9UL33 140 aa13.81□□□□□ -0.2
CCNC-213ENST00000523541 PDCD6O75340 191 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 FBXO24O75426 580 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 CPEP16870 476 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 VDAC2P45880 294 aaPredicted RBP13.8□□□□□ -0.2
CCNC-213ENST00000523541 PSMD7P51665 324 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 LTC4SQ16873 150 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 NSUN5P1Q3KNT7 163 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 SYT6Q5T7P8 510 aaPredicted RBP13.8□□□□□ -0.2
CCNC-213ENST00000523541 LIPKQ5VXJ0 399 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms