RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 APOFQ13790 326 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 CDK5R1Q15078 307 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 LRRC36Q1X8D7 754 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 SLC35D3Q5M8T2 416 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 PYHIN1Q6K0P9 492 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 PLEKHG7Q6ZR37 379 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 LAX1Q8IWV1 398 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 RDH10Q8IZV5 341 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 TCTEX1D1Q8N7M0 179 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 C8orf31Q8N9H6 132 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 ASB17Q8WXJ9 295 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 RITA1Q96K30 269 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 MS4A10Q96PG2 267 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 DGCR6LQ9BY27 220 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 SLC2A8Q9NY64 477 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 ERGIC3Q9Y282 383 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 MYRFQ9Y2G1 1151 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 TRAV39A0A0B4J263 110 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 IGKV1-9A0A0C4DH69 117 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 ZNF785A8K8V0 405 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 TNFRSF11BO00300 401 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 EDF1O60869 148 aaKnown RBP10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 CCNB2O95067 398 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 ZNF137PP52743 207 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 MTCP1P56278 107 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 TPPP2P59282 170 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 RPS7P62081 194 aaKnown RBP10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 LSAMPQ13449 338 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 C5orf64Q2M2E5 130 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 LIN54Q6MZP7 749 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 FAHD1Q6P587 224 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 WFDC3Q8IUB2 231 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 CPOQ8IVL8 374 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 OR2K2Q8NGT1 345 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 TEX47Q8TBZ9 253 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 APOL4Q9BPW4 351 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 CST11Q9H112 138 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 GORASP2Q9H8Y8 452 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 ABCD2Q9UBJ2 740 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 SLC23A1Q9UHI7 598 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 SNX5Q9Y5X3 404 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 NUBP2Q9Y5Y2 271 aa10.42□□□□□ -0.74
NKX3-1-202ENST00000523261 NDUFAB1O14561 156 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 MAGEB4O15481 346 aaPredicted RBP10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 SERPINA3P01011 423 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 MRPL3P09001 348 aaKnown RBP10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 EGR2P11161 476 aaPredicted RBP10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 ACTBP60709 375 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 ODF4Q2M2E3 257 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 RSBN1Q5VWQ0 802 aaPredicted RBP10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 HDXQ7Z353 690 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 OR52M1Q8NGK5 317 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 PLPPR1Q8TBJ4 325 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 RFT1Q96AA3 541 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 ADAM30Q9UKF2 790 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 A3GALT2U3KPV4 340 aa10.41□□□□□ -0.74
NKX3-1-202ENST00000523261 TRAV24A0A0B4J272 114 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 MSGN1A6NI15 193 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 SLC31A2O15432 143 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 NBR2O15453 112 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 SYT7O43581 403 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 PAX5Q02548 391 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 PPP1R8Q12972 351 aaKnown RBP10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 PAN3Q58A45 887 aaKnown RBP10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 ZNF660Q6AZW8 331 aaPredicted RBP10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 CD200R1LQ6Q8B3 271 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 SLC25A48Q6ZT89 311 aaKnown RBP10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 UTP4Q969X6 686 aaKnown RBP10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 GGTLC1Q9BX51 225 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 BARHL1Q9BZE3 327 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 SLA2Q9H6Q3 261 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 CNOT2Q9NZN8 540 aaKnown RBP10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 TMEM14AQ9Y6G1 99 aa10.4□□□□□ -0.74
NKX3-1-202ENST00000523261 ANKRD34BA5PLL1 514 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 H0YJX3 145 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 GMNNO75496 209 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 CD300EQ496F6 205 aaPredicted RBP10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 ACTBL2Q562R1 376 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 ZNF322Q6U7Q0 402 aaPredicted RBP10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 PP6455Q8WZ26 134 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 ZNF251Q9BRH9 671 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 RHOFQ9HBH0 211 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 GFOD1Q9NXC2 390 aa10.39□□□□□ -0.75
NKX3-1-202ENST00000523261 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 IGHV3-43A0A0B4J1X8 118 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 H3BN98 237 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 SDCBPO00560 298 aaPredicted RBP10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 TRGV3P03979 118 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 IGHV3-43DP0DP04 118 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 MAGEA2P43356 314 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 CX3CL1P78423 397 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 ZNF45Q02386 682 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 TMEM267Q0VDI3 215 aaPredicted RBP10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 DYRK1AQ13627 763 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 CD300LDQ6UXZ3 194 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 HACD2Q6Y1H2 254 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 ZNF575Q86XF7 245 aa10.38□□□□□ -0.75
NKX3-1-202ENST00000523261 ZNF439Q8NDP4 499 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms