RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 LRRC75A-AS1Q8N1F1 130 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 POC5Q8NA72 575 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 OR4C16Q8NGL9 310 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 NRGNQ92686 78 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 NINJ1Q92982 152 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 MBD6Q96DN6 1003 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 NEIL1Q96FI4 390 aaPredicted RBP10.85□□□□□ -0.67
CPNE3-205ENST00000522240 PIMREGQ9BSJ6 248 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 ST6GALNAC5Q9BVH7 336 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 DUX4Q9UBX2 424 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
CPNE3-205ENST00000522240 LPAR3Q9UBY5 353 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF230Q9UIE0 474 aaPredicted RBP10.85□□□□□ -0.67
CPNE3-205ENST00000522240 KIF25Q9UIL4 384 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 ANXA10Q9UJ72 324 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 USF3Q68DE3 2245 aa10.85□□□□□ -0.67
CPNE3-205ENST00000522240 MEIKINA0A087WXM9 373 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 ODAMA1E959 279 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 DIRAS3O95661 229 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 RAB3DO95716 219 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 DNASE1P24855 282 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 NPY4RP50391 375 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 DSCR9P59020 149 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 ARPC4P59998 168 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 EDDM3AQ14507 147 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 HMGN3Q15651 99 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 CR1LQ2VPA4 569 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 OR52W1Q6IF63 320 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 MZT2BQ6NZ67 158 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 LYPD2Q6UXB3 125 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 OR5AP2Q8NGF4 316 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 OR8B3Q8NGG8 313 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 OR5H2Q8NGV7 314 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 OR4K15Q8NH41 348 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 OR8B2Q96RD0 313 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 CABLES2Q9BTV7 478 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 C11orf54Q9H0W9 315 aaPredicted RBP10.84□□□□□ -0.67
CPNE3-205ENST00000522240 PATZ1Q9HBE1 687 aaKnown RBP10.84□□□□□ -0.67
CPNE3-205ENST00000522240 HRASLSQ9HDD0 168 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 OR6C3Q9NZP0 311 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 OPN4Q9UHM6 478 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 TRAPPC2LQ9UL33 140 aa10.84□□□□□ -0.67
CPNE3-205ENST00000522240 IGKV1D-8A0A087WSZ0 117 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 TRBV23-1A0A0A0MS06 115 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 TRDCB7Z8K6 153 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 DVL1O14640 695 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 FABP7O15540 132 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 HLA-DMAP28067 261 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 HRH1P35367 487 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 GLIPR1P48060 266 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 EDDM3BP56851 147 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 MEF2CQ06413 473 aaPredicted RBP10.83□□□□□ -0.68
CPNE3-205ENST00000522240 CDK10Q15131 360 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 DEFB113Q30KQ7 82 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 CHRFAM7AQ494W8 412 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 ARRDC1Q8N5I2 433 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 MINDY2Q8NBR6 621 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 OR4A4PQ8NGN8 299 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 C10orf105Q8TEF2 133 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 MAFIPQ8WZ33 124 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 FAM168AQ92567 244 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 PERPQ96FX8 193 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 BPESC1Q9GZL8 116 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 RAB9BQ9NP90 201 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 SLC2A8Q9NY64 477 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 AKAP6Q13023 2319 aa10.83□□□□□ -0.68
CPNE3-205ENST00000522240 AKAP9Q99996 3911 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 LINC00854A0A1B0GVQ3 168 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 VWC2LB2RUY7 222 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 FCN3O75636 299 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 FCER2P06734 321 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 WNT2P09544 360 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 CTXN2P0C2S0 81 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 NDUFB7P17568 137 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 RCC1P18754 421 aaPredicted RBP10.82□□□□□ -0.68
CPNE3-205ENST00000522240 BTCP35070 178 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 GLP1RP43220 463 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 OR3A3P47888 321 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 ZNF841Q6ZN19 808 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 OR13A1Q8NGR1 328 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 CORO2AQ92828 525 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 LURAP1Q96LR2 239 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 NECAP2Q9NVZ3 263 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 ING3Q9NXR8 418 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 KCNIP1Q9NZI2 227 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 PCDHB10Q9UN67 800 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 LINC00312Q9Y6C7 94 aa10.82□□□□□ -0.68
CPNE3-205ENST00000522240 TRGV10A0A0A0MS01 117 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 hADV38S2A0JD32 116 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 DISC1C4P0D8 188 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 NPIPB11E5RHQ5 1161 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 M0QYG6 137 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 IGHV2-5P01817 119 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 SLC6A1P30531 599 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 RFX2P48378 723 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 TMEM30BQ3MIR4 351 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 WDR25Q64LD2 544 aaPredicted RBP10.81□□□□□ -0.68
CPNE3-205ENST00000522240 OVCH2Q7RTZ1 564 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 TMEM17Q86X19 198 aa10.81□□□□□ -0.68
CPNE3-205ENST00000522240 TPRX1Q8N7U7 411 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms