RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 RPS3P23396 243 aaKnown RBP eCLIP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 RPS12P25398 132 aaKnown RBP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 HTR1FP30939 366 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 BRS3P32247 399 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 APLNRP35414 380 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 POLR2IP36954 125 aaKnown RBP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 CRYBB2P43320 205 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 DNASE1L1P49184 302 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 PRLHRP49683 370 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 CRISP1P54107 249 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 HTR4Q13639 388 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 TMEM69Q5SWH9 247 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 CST9Q5W186 159 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 KDM4DQ6B0I6 523 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 MBOAT2Q6ZWT7 520 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 TMEM25Q86YD3 366 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 NFAM1Q8NET5 270 aaPredicted RBP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 SDR9C7Q8NEX9 313 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 OR8D4Q8NGM9 314 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 OR4A4PQ8NGN8 299 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 OR13C8Q8NGS7 320 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 OR2AE1Q8NHA4 323 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 ZNF431Q8TF32 576 aaPredicted RBP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 RAB8BQ92930 207 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 MALSU1Q96EH3 234 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 PIK3IP1Q96FE7 263 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 CDCA4Q9BXL8 241 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 DUSP21Q9H596 190 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 PATZ1Q9HBE1 687 aaKnown RBP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 TMEM38BQ9NVV0 291 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 MARCOQ9UEW3 520 aaPredicted RBP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 DICER1Q9UPY3 1922 aaKnown RBP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 EXOSC1Q9Y3B2 195 aaKnown RBP5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 RNF115Q9Y4L5 304 aa5.1□□□□□ -1.59
NUDCD1-204ENST00000521439 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 TRAV9-2A0A087WT02 112 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 A0A0G2JN53 185 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 KIR2DL5BA0A0G2JN68 375 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 KIR2DL5BA0A0G2JPC4 375 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 SLC22A20A6NK97 555 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 ZNF878C9JN71 531 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 MANBAO00462 879 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 ERI3O43414 337 aaKnown RBP5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 FOXH1O75593 365 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 MPZL1O95297 269 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 CDS2O95674 445 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 OR13C7P0DN81 318 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 SPNP16150 400 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 ALOX5APP20292 161 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 MDH2P40926 338 aaKnown RBP5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 RAB10P61026 200 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 LMO4P61968 165 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 SNRPD2P62316 118 aaKnown RBP5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 SELENOWP63302 87 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 ZNF763Q0D2J5 394 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 C2orf80Q0P641 193 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 ZIC1Q15915 447 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 UBE2SQ16763 222 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 TTLL9Q3SXZ7 439 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 ZNF404Q494X3 552 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 MESTQ5EB52 335 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 LDLRAD2Q5SZI1 272 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 STUMQ69YW2 141 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 FBXW12Q6X9E4 464 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 FA2HQ7L5A8 372 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 KIR2DL5AQ8N109 375 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 OR6K2Q8NGY2 324 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 OR13C6PQ8NH95 151 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 KIR2DL5BQ8NHK3 375 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 SPPL2BQ8TCT7 592 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 CANT1Q8WVQ1 401 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 ARL11Q969Q4 196 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 HIST1H2BAQ96A08 127 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 GALMQ96C23 342 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 FLYWCH2Q96CP2 140 aaKnown RBP5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 C10orf35Q96D05 121 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 DNAJA3Q96EY1 480 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 BTF3L4Q96K17 158 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 OR10C1Q96KK4 312 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 C9orf85Q96MD7 179 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 KCTD7Q96MP8 289 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 S100A13Q99584 98 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 PYGO2Q9BRQ0 406 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 SMCO4Q9NRQ5 59 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 SPANXB1Q9NS25 103 aaPredicted RBP5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 FBXL12Q9NXK8 326 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 SPANXCQ9NY87 97 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 RAB22AQ9UL26 194 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 ST3GAL6Q9Y274 331 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 WDR45Q9Y484 360 aa5.09□□□□□ -1.59
NUDCD1-204ENST00000521439 HCFC1P51610 2035 aa5.09□□□□□ -1.6
NUDCD1-204ENST00000521439 RALGAPA1Q6GYQ0 2036 aa5.08□□□□□ -1.6
NUDCD1-204ENST00000521439 TP53BP1Q12888 1972 aaPredicted RBP5.08□□□□□ -1.6
NUDCD1-204ENST00000521439 IGKV3D-20A0A0C4DH25 116 aa5.08□□□□□ -1.6
NUDCD1-204ENST00000521439 A0A1W2PRF3 423 aa5.08□□□□□ -1.6
NUDCD1-204ENST00000521439 A0A1W2PRM7 423 aa5.08□□□□□ -1.6
NUDCD1-204ENST00000521439 TMEM150BA6NC51 233 aa5.08□□□□□ -1.6
NUDCD1-204ENST00000521439 CASKO14936 926 aa5.08□□□□□ -1.6
NUDCD1-204ENST00000521439 ICOSLGO75144 302 aa5.08□□□□□ -1.6
NUDCD1-204ENST00000521439 ZNF253O75346 499 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms