RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 LPCAT4Q643R3 524 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 SYS1Q8N2H4 156 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 LINC00311Q8N616 119 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 C8orf31Q8N9H6 132 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 OR52M1Q8NGK5 317 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 OR5AK2Q8NH90 309 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 TNFAIP8L1Q8WVP5 186 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 TSEN15Q8WW01 171 aaKnown RBP11.68□□□□□ -0.54
PRKDC-204ENST00000521331 PRR25Q96S07 402 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 ALG8Q9BVK2 526 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 DPCDQ9BVM2 203 aaPredicted RBP11.68□□□□□ -0.54
PRKDC-204ENST00000521331 ORC6Q9Y5N6 252 aa11.68□□□□□ -0.54
PRKDC-204ENST00000521331 IGHV3-72A0A0B4J1Y9 119 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 A0A1W2PPE3 182 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 SAC3D1A6NKF1 404 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 SEC14L6B5MCN3 397 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 GABRPO00591 440 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 IL3RAP26951 378 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 CD1BP29016 333 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 ECI1P42126 302 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 REG1BP48304 166 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 ASCL4Q6XD76 172 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 SATL1Q86VE3 508 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 Q8N9W7 124 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 OR8H1Q8NGG4 311 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 C4orf3Q8WVX3 66 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 LGALS12Q96DT0 336 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 RASL11BQ9BPW5 248 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 FAM192AQ9GZU8 254 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 IFT22Q9H7X7 185 aa11.67□□□□□ -0.54
PRKDC-204ENST00000521331 TRAV39A0A0B4J263 110 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 TMEM30CPA0ZSE6 113 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 MOSP00540 346 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 IGHG4P01861 327 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 VDAC1P21796 283 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 RASSF2P50749 326 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 Q3ZCU0 254 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 NHLRC3Q5JS37 347 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 ZNF529Q6P280 563 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 LHFPL3Q86UP9 236 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 OR10K1Q8NGX5 313 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 RTN4IP1Q8WWV3 396 aaPredicted RBP11.66□□□□□ -0.54
PRKDC-204ENST00000521331 ARL11Q969Q4 196 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 S1PR3Q99500 378 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 PDCD1LG2Q9BQ51 273 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 ST3GAL6Q9Y274 331 aa11.66□□□□□ -0.54
PRKDC-204ENST00000521331 SDCBPO00560 298 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-204ENST00000521331 TXNL1O43396 289 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 OR7C1O76099 320 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-204ENST00000521331 HTR3BO95264 441 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 ATP6V1G2O95670 118 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 ALPLP05186 524 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 OR5H8P0DN80 308 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 CHATP28329 748 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 CFHR3Q02985 330 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 FHL3Q13643 280 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 LINC00596Q86U02 117 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 TMEM104Q8NE00 496 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 OR51A2Q8NGJ7 313 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 ST6GALNAC6Q969X2 333 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 METTL9Q9H1A3 318 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 ISG20L2Q9H9L3 353 aaKnown RBP11.65□□□□□ -0.54
PRKDC-204ENST00000521331 PLSCR3Q9NRY6 295 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 GFOD1Q9NXC2 390 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 IL36GQ9NZH8 169 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 SCOCQ9UIL1 159 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 ZNF580Q9UK33 172 aa11.65□□□□□ -0.54
PRKDC-204ENST00000521331 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
PRKDC-204ENST00000521331 C15orf65H3BRN8 121 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 ORC5O43913 435 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 FADS2O95864 444 aaKnown RBP11.64□□□□□ -0.55
PRKDC-204ENST00000521331 CSTBP04080 98 aaKnown RBP11.64□□□□□ -0.55
PRKDC-204ENST00000521331 IGF1P05019 195 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 CD2P06729 351 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 SOX6P35712 828 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 INSL3P51460 131 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 GBX2P52951 348 aaPredicted RBP11.64□□□□□ -0.55
PRKDC-204ENST00000521331 RBM11P57052 281 aaKnown RBP11.64□□□□□ -0.55
PRKDC-204ENST00000521331 FAM71E2Q8N5Q1 922 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 OR52N1Q8NH53 320 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 CHCHD6Q9BRQ6 235 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 JAM3Q9BX67 310 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
PRKDC-204ENST00000521331 PAK1IP1Q9NWT1 392 aaPredicted RBP11.64□□□□□ -0.55
PRKDC-204ENST00000521331 E9PI62 339 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 PSMB8P28062 276 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF137PP52743 207 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 MPV17LQ2QL34 196 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 TMEM30BQ3MIR4 351 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF260Q3ZCT1 412 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 KCTD7Q96MP8 289 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 Q96MT0 163 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 S100A13Q99584 98 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 ASCL2Q99929 193 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 HSPB9Q9BQS6 159 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 CHCHD3Q9NX63 227 aaKnown RBP11.63□□□□□ -0.55
PRKDC-204ENST00000521331 ERVK13-1Q9NX77 482 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms