RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 FNDC4Q9H6D8 234 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SP140LQ9H930 580 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 RAB18Q9NP72 206 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SCRT2Q9NQ03 307 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 MAN2C1Q9NTJ4 1040 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 USE1Q9NZ43 259 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 ZMAT5Q9UDW3 170 aaKnown RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 SLC35A3Q9Y2D2 325 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 POFUT2Q9Y2G5 429 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 KLHDC2Q9Y2U9 406 aa2.88□□□□□ -1.95
VPS13B-208ENST00000521037 FLG2Q5D862 2391 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-208ENST00000521037 IGHV4OR15-8A0A075B7B6 117 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 A0A087WUJ7 227 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 IGLV9-49A0A0B4J1Y8 123 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 A0A1W2PS18 150 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 C5orf49A4QMS7 147 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 SYCE1LA8MT33 242 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 A8MT66 165 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ODF3BA8MYP8 253 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 M0QX08 132 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 NME4O00746 187 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 DLGAP1O14490 977 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 SH2D1BO14796 132 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 AZIN1O14977 448 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 LSM1O15116 133 aaKnown RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 WBP4O75554 376 aaKnown RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 STX11O75558 287 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ECDO95905 644 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 OTCP00480 354 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 GYPAP02724 150 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 HLA-DPB1P04440 258 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 GKN3PP0CG01 181 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF823P16415 610 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 AADACP22760 399 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CD40LGP29965 261 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CD200P41217 278 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 RPS5P46782 204 aaKnown RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 DYNLT3P51808 116 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 PJVKQ0ZLH3 352 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 GK3PQ14409 553 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 P2RY14Q15391 338 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CYP51A1Q16850 503 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 DGUOKQ16854 277 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 FAM106AQ4KMX7 169 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 RFTN2Q52LD8 501 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CYBRD1Q53TN4 286 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF678Q5SXM1 525 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 GPR107Q5VW38 600 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 PRAMEF6Q5VXH4 476 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 SLX4IPQ5VYV7 408 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 DMKNQ6E0U4 476 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CEMP1Q6PRD7 247 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ARL9Q6T311 187 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 KCTD8Q6ZWB6 473 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 PRSS48Q7RTY5 328 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 C16orf62Q7Z3J2 963 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF329Q86UD4 541 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 RIMKLAQ8IXN7 391 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 C8orf59Q8N0T1 100 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 OSR2Q8N2R0 312 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF645Q8N7E2 425 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 FAM216BQ8N7L0 139 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF383Q8NA42 475 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF555Q8NEP9 628 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 SLC26A10Q8NG04 563 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 OR8J3Q8NGG0 315 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 OR51G2Q8NGK0 314 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 OR5D13Q8NGL4 314 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 OR5AK3PQ8NH89 298 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF563Q8TA94 476 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 MYOZ3Q8TDC0 251 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 GPR148Q8TDV2 347 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CANT1Q8WVQ1 401 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 TMED6Q8WW62 240 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNRF4Q8WWF5 429 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CYGBQ8WWM9 190 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 SLC35B4Q969S0 331 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF479Q96JC4 524 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF382Q96SR6 550 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 KCTD14Q9BQ13 255 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ZNF649Q9BS31 505 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 C1orf198Q9H425 327 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 TUBB1Q9H4B7 451 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 REEP4Q9H6H4 257 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 MED20Q9H944 212 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ELOVL3Q9HB03 270 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CCNB1IP1Q9NPC3 277 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 MIEF1Q9NQG6 463 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 GLTPQ9NZD2 209 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 CCDC167Q9P0B6 97 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 FAM32AQ9Y421 112 aaKnown RBP2.87□□□□□ -1.95
VPS13B-208ENST00000521037 ORC6Q9Y5N6 252 aa2.87□□□□□ -1.95
VPS13B-208ENST00000521037 IGHV3OR15-7A0A075B7D8 119 aa2.86□□□□□ -1.95
VPS13B-208ENST00000521037 A0A087WYN8 130 aa2.86□□□□□ -1.95
VPS13B-208ENST00000521037 TRBV4-1A0A0J9YWV2 114 aa2.86□□□□□ -1.95
VPS13B-208ENST00000521037 SNURFLB1AK76 121 aa2.86□□□□□ -1.95
VPS13B-208ENST00000521037 FXYD1O00168 92 aa2.86□□□□□ -1.95
VPS13B-208ENST00000521037 SLC1A7O00341 560 aa2.86□□□□□ -1.95
VPS13B-208ENST00000521037 PLPP3O14495 311 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms