RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 BATF2Q8N1L9 274 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 BPIFCQ8NFQ6 507 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 LYPD6BQ8NI32 183 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 MRPL30Q8TCC3 161 aaKnown RBP3.81□□□□□ -1.8
PABPC1-212ENST00000519622 GLYATL2Q8WU03 294 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 OR5P3Q8WZ94 311 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 SLAMF9Q96A28 289 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 BORCS8Q96FH0 119 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 C5orf30Q96GV9 206 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 SMIM8Q96KF7 97 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 ZNF488Q96MN9 340 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 TP53RKQ96S44 253 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 ARPC5LQ9BPX5 153 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 CABLES2Q9BTV7 478 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 STRADBQ9C0K7 418 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 Q9N2K0 584 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 ZNF701Q9NV72 531 aaPredicted RBP3.81□□□□□ -1.8
PABPC1-212ENST00000519622 DNAJB11Q9UBS4 358 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 ST3GAL6Q9Y274 331 aa3.81□□□□□ -1.8
PABPC1-212ENST00000519622 CARHSP1Q9Y2V2 147 aaKnown RBP3.81□□□□□ -1.8
PABPC1-212ENST00000519622 NOSIPQ9Y314 301 aaKnown RBP3.81□□□□□ -1.8
PABPC1-212ENST00000519622 CHD3Q12873 2000 aaKnown RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 A0A0G2JRQ6 117 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 A0A1W2PR80 420 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 CLEC18AA5D8T8 446 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 SLC22A20A6NK97 555 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 CD300LBA8K4G0 201 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 NPIPB11E5RHQ5 1161 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 K7EPK0 472 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 ABCD4O14678 606 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 MGST3O14880 152 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 BET1O15155 118 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 LRP3O75074 770 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 MRPL33O75394 65 aaKnown RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 RHBDL1O75783 438 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 CEACAM4O75871 244 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 TNFSF15O95150 251 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 IFNA2P01563 188 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 IGKV1-39P01597 117 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 GAPDHP04406 335 aaKnown RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 IGKV1D-39P04432 117 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 IFNA6P05013 189 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 HOXB5P09067 269 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 SCTP09683 121 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 OR5AC1P0C628 307 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 COX5AP20674 150 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 IGHV1-2P23083 117 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 PPIFP30405 207 aaKnown RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 GNRHRP30968 328 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 RBMXP38159 391 aaKnown RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 TNFSF10P50591 281 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 GMFBP60983 142 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 ERVS71-1P61550 626 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 HOXA4Q00056 320 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 SRYQ05066 204 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 EIF4EBP1Q13541 118 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 ARL6IP1Q15041 203 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 RSU1Q15404 277 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 TSC22D1Q15714 1073 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 FAM189A2Q15884 450 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 GUCA2BQ16661 112 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 CEACAM21Q3KPI0 293 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 SP6Q3SY56 376 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 NMSQ5H8A3 153 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 ZNF766Q5HY98 468 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 ZNF324BQ6AW86 544 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 TMEM211Q6ICI0 200 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 UNQ6126/PRO20091Q6UXV3 157 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 FBXW12Q6X9E4 464 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 LYZL2Q7Z4W2 148 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 MDP1Q86V88 176 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 ZNF575Q86XF7 245 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 BAP18Q8IXM2 172 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 C11orf53Q8IXP5 236 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 C17orf78Q8N4C9 275 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 FAM71E2Q8N5Q1 922 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 WDR31Q8NA23 367 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 CLEC18CQ8NCF0 446 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 OR52M1Q8NGK5 317 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 SUN5Q8TC36 379 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 C17orf50Q8WW18 174 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 TMED6Q8WW62 240 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 PIGCQ92535 297 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 DCUN1D4Q92564 292 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 APOBEC3DQ96AK3 386 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 TMEM56Q96MV1 263 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 TECTBQ96PL2 329 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 CMSS1Q9BQ75 279 aaKnown RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 PAPOLGQ9BWT3 736 aaKnown RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 ZNF471Q9BX82 626 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 PARP12Q9H0J9 701 aaKnown RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 OR51I2Q9H344 312 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 CALHM2Q9HA72 323 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 HES4Q9HCC6 221 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 C12orf4Q9NQ89 552 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 SLC2A9Q9NRM0 540 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 PLEKHJ1Q9NW61 149 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 FBXL17Q9UF56 701 aa3.8□□□□□ -1.8
PABPC1-212ENST00000519622 KLF13Q9Y2Y9 288 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-212ENST00000519622 ZNF175Q9Y473 711 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms