RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 GZMHP20718 246 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
SDC2-203ENST00000519587 KIR2DS4P43632 304 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 ACTBP60709 375 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 ACTG1P63261 375 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 ZNF45Q02386 682 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 MADCAM1Q13477 382 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 KIR2DS1Q14954 304 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 TMEM30BQ3MIR4 351 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 DCAF12L2Q5VW00 463 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 TMEM200BQ69YZ2 307 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 LY6G5BQ8NDX9 201 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 OR4K15Q8NH41 348 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 MRGPRDQ8TDS7 321 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 CCDC107Q8WV48 283 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 FCAMRQ8WWV6 532 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 CORO2AQ92828 525 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 TMEM186Q96B77 213 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 HDHD3Q9BSH5 251 aaPredicted RBP11.67□□□□□ -0.54
SDC2-203ENST00000519587 ZNF286AQ9HBT8 521 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 MBNL3Q9NUK0 354 aaKnown RBP11.67□□□□□ -0.54
SDC2-203ENST00000519587 OPN4Q9UHM6 478 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 M0R1W7 72 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 CTDSPLO15194 276 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 ORC5O43913 435 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 ZNF728P0DKX0 622 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 DVL1P1P54792 670 aaPredicted RBP11.66□□□□□ -0.54
SDC2-203ENST00000519587 HLA-DRB3P79483 266 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 SSBP1Q04837 148 aaKnown RBP11.66□□□□□ -0.54
SDC2-203ENST00000519587 SRSF7Q16629 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
SDC2-203ENST00000519587 PYDC2Q56P42 97 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 METTL11BQ5VVY1 283 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 OR13A1Q8NGR1 328 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 SMIM4Q8WVI0 70 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 MSI2Q96DH6 328 aaKnown RBP11.66□□□□□ -0.54
SDC2-203ENST00000519587 C18orf12Q96KH6 178 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 TMUB1Q9BVT8 246 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 CALYQ9NYX4 217 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 KPTNQ9Y664 436 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 V9GYH0 126 aa11.66□□□□□ -0.54
SDC2-203ENST00000519587 KBTBD11-OT1A0A1B0GTJ5 212 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 GABARAPH6UMI1 98 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 J3QLI3 93 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 SSX5O60225 188 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 TGFAP01135 160 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 ZNF16P17020 682 aaPredicted RBP11.65□□□□□ -0.54
SDC2-203ENST00000519587 RCVRNP35243 200 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 PAX2Q02962 417 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 ZNF273Q14593 569 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 ZNF880Q6PDB4 577 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 Q6ZS49 121 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 TCF23Q7RTU1 214 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 CIARTQ8N365 385 aaPredicted RBP11.65□□□□□ -0.54
SDC2-203ENST00000519587 GPX8Q8TED1 209 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 DACT3Q96B18 629 aaPredicted RBP11.65□□□□□ -0.54
SDC2-203ENST00000519587 ABHD1Q96SE0 405 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 SOSTQ9BQB4 213 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 OCSTAMPQ9BR26 566 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 WDR12Q9GZL7 423 aaKnown RBP11.65□□□□□ -0.54
SDC2-203ENST00000519587 Q9N2K0 584 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 ELF5Q9UKW6 265 aaPredicted RBP11.65□□□□□ -0.54
SDC2-203ENST00000519587 INSIG2Q9Y5U4 225 aa11.65□□□□□ -0.54
SDC2-203ENST00000519587 ARHGAP32A7KAX9 2087 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 ABCA1O95477 2261 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 TRDCB7Z8K6 153 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 C12orf77C9JDV5 145 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 GSTZ1O43708 216 aaPredicted RBP11.64□□□□□ -0.55
SDC2-203ENST00000519587 RBBP9O75884 186 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 INHBBP09529 407 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 PTHLHP12272 177 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 FOSL1P15407 271 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 RCC1P18754 421 aaPredicted RBP11.64□□□□□ -0.55
SDC2-203ENST00000519587 SSTR5P35346 364 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 ARPC4P59998 168 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 ERVFRD-1P60508 538 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 HMGN3Q15651 99 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 CR1LQ2VPA4 569 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 RNASE12Q5GAN4 147 aaKnown RBP11.64□□□□□ -0.55
SDC2-203ENST00000519587 STEAP3Q658P3 488 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 C1orf122Q6ZSJ8 110 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 GDPD1Q8N9F7 314 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 BEST4Q8NFU0 473 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 OR10A7Q8NGE5 316 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 GCDHQ92947 438 aaPredicted RBP11.64□□□□□ -0.55
SDC2-203ENST00000519587 ARL11Q969Q4 196 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 ST6GALNAC5Q9BVH7 336 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 METTL8Q9H825 291 aaKnown RBP11.64□□□□□ -0.55
SDC2-203ENST00000519587 TAF9BQ9HBM6 251 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 AKIP1Q9NQ31 210 aa11.64□□□□□ -0.55
SDC2-203ENST00000519587 TRAV39A0A0B4J263 110 aa11.63□□□□□ -0.55
SDC2-203ENST00000519587 MEX3AA1L020 520 aaKnown RBP11.63□□□□□ -0.55
SDC2-203ENST00000519587 MEIOCA2RUB1 952 aa11.63□□□□□ -0.55
SDC2-203ENST00000519587 FABP7O15540 132 aa11.63□□□□□ -0.55
SDC2-203ENST00000519587 DIRAS3O95661 229 aa11.63□□□□□ -0.55
SDC2-203ENST00000519587 HBZP02008 142 aa11.63□□□□□ -0.55
SDC2-203ENST00000519587 CCL3L1P16619 93 aa11.63□□□□□ -0.55
SDC2-203ENST00000519587 TBPP20226 339 aa11.63□□□□□ -0.55
SDC2-203ENST00000519587 TAS2R46P59540 309 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms