RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 HMSDA8MTL9 139 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 M0R233 179 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 RBMXP38159 391 aaKnown RBP6.7□□□□□ -1.34
CLK4-203ENST00000519583 HTR2BP41595 481 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 PIGPP57054 158 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 PHLDA2Q53GA4 152 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 TEX261Q6UWH6 196 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 ZNF767PQ75MW2 155 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 LRP11Q86VZ4 500 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 OR5T2Q8NGG2 359 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 TMEM171Q8WVE6 324 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 PPP1R1CQ8WVI7 109 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 NINJ1Q92982 152 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 MOB3AQ96BX8 217 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 UFSP2Q9NUQ7 469 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 RDH8Q9NYR8 311 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 COMMD9Q9P000 198 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 DUSP13Q9UII6 198 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 U3KQ87 197 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 A0A0B4J2A0 478 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 WNT9BO14905 357 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 BET1O15155 118 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 OR2H2O95918 312 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 IFNA2P01563 188 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 HERV-K104P61576 105 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 HERPUD1Q15011 391 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 PAN3Q58A45 887 aaKnown RBP6.7□□□□□ -1.34
CLK4-203ENST00000519583 GSG1LQ6UXU4 331 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 Q6ZS49 121 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 SGPP2Q8IWX5 399 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 C11orf53Q8IXP5 236 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 MUC15Q8N387 334 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 IFT22Q9H7X7 185 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 RHOFQ9HBH0 211 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 SHPKQ9UHJ6 478 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 SPEF1Q9Y4P9 236 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 CSMD1Q96PZ7 3565 aa6.7□□□□□ -1.34
CLK4-203ENST00000519583 ARID1AO14497 2285 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 LRBAP50851 2863 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 CRYM-AS1A6NIL9 109 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 MPTX1A8MV57 137 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 TRDCB7Z8K6 153 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 DANCRP0C864 163 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 APOBEC3AP31941 199 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 CEBPDP49716 269 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 RBM39Q14498 530 aaKnown RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 ATXN7L3Q14CW9 347 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 ABCA11PQ4W5N1 156 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 POC1AQ8NBT0 407 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 ZNF680Q8NEM1 530 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 RAB18Q9NP72 206 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 OR14J1Q9UGF5 321 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 CSMD2Q7Z408 3487 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 RAI1Q7Z5J4 1906 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 TRAV39A0A0B4J263 110 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 KIR2DS1A0A191URI9 304 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 SLC33A1O00400 549 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 CFDP00746 253 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 PPYP01298 95 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 RCC1P18754 421 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 KIR2DS4P43632 304 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 AP2S1P53680 142 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 FGL1Q08830 312 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 KIR2DS1Q14954 304 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 SRSF7Q16629 238 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLK4-203ENST00000519583 DEFB113Q30KQ7 82 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 TMUB2Q71RG4 321 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 C1orf174Q8IYL3 243 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 NUP37Q8NFH4 326 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 OR2Z1Q8NG97 314 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 OR11L1Q8NGX0 322 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 MFFQ9GZY8 342 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 ARL6Q9H0F7 186 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 RIMS4Q9H426 269 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 MYO9AB2RTY4 2548 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 TEX15Q9BXT5 2789 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 PDZD2O15018 2839 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 IGKV1-6A0A0C4DH72 117 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 hCG_1807616A0A1W2PRN6 198 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 VSTM5A8MXK1 200 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 TK1P04183 234 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 GLAP06280 429 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 HOXB5P09067 269 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 OR4A8P0C604 315 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 C4BPBP20851 252 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 NKX6-1P78426 367 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 ZNF146Q15072 292 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 SP6Q3SY56 376 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 C11orf87Q6NUJ2 197 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 ZNF546Q86UE3 836 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 PLPPR1Q8TBJ4 325 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 RTN4IP1Q8WWV3 396 aaPredicted RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 SYT3Q9BQG1 590 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 METTL8Q9H825 291 aaKnown RBP6.69□□□□□ -1.34
CLK4-203ENST00000519583 TMEM165Q9HC07 324 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 SLC2A9Q9NRM0 540 aa6.69□□□□□ -1.34
CLK4-203ENST00000519583 ZSCAN5BA6NJL1 495 aa6.68□□□□□ -1.34
CLK4-203ENST00000519583 SH2D1BO14796 132 aa6.68□□□□□ -1.34
CLK4-203ENST00000519583 HAND1O96004 215 aa6.68□□□□□ -1.34
CLK4-203ENST00000519583 RPA2P15927 270 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms