RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 CEACAM1P13688 526 aa14.16□□□□□ -0.14
PCDHGA11-202ENST00000518882 IZUMO4Q1ZYL8 232 aa14.16□□□□□ -0.14
PCDHGA11-202ENST00000518882 PCSK4Q6UW60 755 aa14.16□□□□□ -0.14
PCDHGA11-202ENST00000518882 OR5D13Q8NGL4 314 aa14.16□□□□□ -0.14
PCDHGA11-202ENST00000518882 ATP5SQ99766 215 aa14.16□□□□□ -0.14
PCDHGA11-202ENST00000518882 BCL2L14Q9BZR8 327 aa14.16□□□□□ -0.14
PCDHGA11-202ENST00000518882 ATP23Q9Y6H3 246 aa14.16□□□□□ -0.14
PCDHGA11-202ENST00000518882 SYNGR1O43759 233 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 FOXG1P55316 489 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 LURAP1LQ8IV03 231 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 CMTM1Q8IZ96 169 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 POM121Q96HA1 1249 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 PRRG4Q9BZD6 226 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 ZMAT5Q9UDW3 170 aaKnown RBP14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 TINAGQ9UJW2 476 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 PILRBQ9UKJ0 227 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 TGIF2-C20orf24A0A0A6YYL0 155 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 H0Y980 276 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 WRBO00258 174 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 HLA-HP01893 362 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 MMP9P14780 707 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 GDF1P27539 372 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 OTX2P32243 289 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 ARF1P84077 181 aaKnown RBP14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 TMEM267Q0VDI3 215 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 ZNF488Q96MN9 340 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 TOLLIPQ9H0E2 274 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 DOK5Q9P104 306 aa14.15□□□□□ -0.14
PCDHGA11-202ENST00000518882 C5orf49A4QMS7 147 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 NTN3O00634 580 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 GFRA1P56159 465 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 NDUFA6P56556 154 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 TAS2R30P59541 319 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 RPL23AP62750 156 aaKnown RBP14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 ZNF674Q2M3X9 581 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 CEACAM21Q3KPI0 293 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 PPP1R32Q7Z5V6 425 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 TVP23CQ96ET8 276 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 ZNF552Q9H707 407 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 MUC3AQ02505 3323 aa14.14□□□□□ -0.15
PCDHGA11-202ENST00000518882 KIR2DS1A0A191URI9 304 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 KIAA1324LA8MWY0 1029 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 RD3LP0DJH9 198 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 F2RP25116 425 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 KIR2DS4P43632 304 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 TLE4Q04727 773 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 ZFP36L1Q07352 338 aaKnown RBP14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 KIR2DS1Q14954 304 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 PYY3Q5JQD4 70 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 CDPF1Q6NVV7 123 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 THNSL2Q86YJ6 484 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 ZDHHC23Q8IYP9 409 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 OR51H1Q8NH63 302 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 MRPL30Q8TCC3 161 aaKnown RBP14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 GPR146Q96CH1 333 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 NIPSNAP3BQ9BS92 247 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 TCFL5Q9UL49 500 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 NOSIPQ9Y314 301 aaKnown RBP14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 NGFP01138 241 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 CFIP05156 583 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 CDX1P47902 265 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 IL24Q13007 206 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 MPV17LQ2QL34 196 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 SPNS3Q6ZMD2 512 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 Q6ZRM9 215 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 SAXO1Q8IYX7 474 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 RBMXL1Q96E39 390 aaKnown RBP14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 RSG1Q9BU20 258 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIPK2Q9H2X6 1198 aa14.13□□□□□ -0.15
PCDHGA11-202ENST00000518882 DIDO1Q9BTC0 2240 aaKnown RBP14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 TRAPPC2LH3BP13 241 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 MRPL33O75394 65 aaKnown RBP14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 PSG2P11465 335 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 RNPS1Q15287 305 aaKnown RBP14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 PMS2CLQ68D20 193 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 ZNF324BQ6AW86 544 aaPredicted RBP14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 MRPL21Q7Z2W9 205 aaKnown RBP14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 IL22RA2Q969J5 263 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 VSIRQ9H7M9 311 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 MED12LQ86YW9 2145 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 DNAJC13O75165 2243 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 LOC102723971A0A1B0GUV8 181 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 PATE3B3GLJ2 98 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HS3ST1O14792 307 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST1H2BKO60814 126 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 LILRA1O75019 489 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST1H2BJP06899 126 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST1H2BOP23527 126 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST1H2BBP33778 126 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 GLIPR1P48060 266 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST1H2BDP58876 126 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 RAB2AP61019 212 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST1H2BCP62807 126 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 SRYQ05066 204 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST2H2BEQ16778 126 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 KHDC3LQ587J8 217 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 ZNF610Q8N9Z0 462 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 HIST1H2BHQ93079 126 aa14.12□□□□□ -0.15
PCDHGA11-202ENST00000518882 TMEM45BQ96B21 275 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms