RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 NIPA1Q7RTP0 329 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 PRNTQ86SH4 94 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 CCDC50Q8IVM0 306 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 SERPINA12Q8IW75 414 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 CLDN19Q8N6F1 224 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 RAB3IL1Q8TBN0 382 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 CANT1Q8WVQ1 401 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 FAM162AQ96A26 154 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 TMA16Q96EY4 203 aaKnown RBP-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 NAP1L5Q96NT1 182 aaPredicted RBP-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 SLF1Q9BQI6 1058 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 CHID1Q9BWS9 393 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 NIPAL2Q9H841 368 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 MRPS30Q9NP92 439 aaKnown RBP-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 HEBP1Q9NRV9 189 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 PTBP2Q9UKA9 531 aaKnown RBP-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 ZNF257Q9Y2Q1 563 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 SNX5Q9Y5X3 404 aa-2.86□□□□□ -2.87
SNORA40.16-201ENST00000517238 CNTNAP1P78357 1384 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 A0A087WUU8 490 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 TRBV6-4A0A1B0GX49 114 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 OR5K4A6NMS3 321 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 C21orf140B9A014 251 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 POLR2DO15514 142 aaKnown RBP-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 CLDN3O15551 220 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 PRTN3P24158 256 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 HADHQ16836 314 aaKnown RBP-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 KCNIP4Q6PIL6 250 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 TMEM150AQ86TG1 271 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 SLC13A5Q86YT5 568 aaPredicted RBP-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 TUSC5Q8IXB3 177 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 LINC00311Q8N616 119 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 KRTCAP2Q8N6L1 136 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 MITD1Q8WV92 249 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 PPWD1Q96BP3 646 aaKnown RBP-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 FER1L6-AS2Q96M78 137 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 SCLT1Q96NL6 688 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 OR5B12Q96R08 314 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 TEAD3Q99594 435 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 TMEM117Q9H0C3 514 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 ILKAPQ9H0C8 392 aaPredicted RBP-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 RIBC2Q9H4K1 309 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 PRMT8Q9NR22 394 aaPredicted RBP-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 VPS28Q9UK41 221 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 GSTK1Q9Y2Q3 226 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 JCADQ9P266 1359 aa-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 DICER1Q9UPY3 1922 aaKnown RBP-2.87□□□□□ -2.87
SNORA40.16-201ENST00000517238 IGHV3OR15-7A0A075B7D8 119 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 IGHV1-45A0A0A0MS14 117 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 PPP1R2P9O14990 202 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 ATP8B1O43520 1251 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 COX7A2P2O60397 106 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 FCMRO60667 390 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 DIRAS3O95661 229 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 HSPA5P11021 654 aaKnown RBP-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 RALAP11233 206 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 CYP2F1P24903 491 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 CD82P27701 267 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 YWHAGP61981 247 aaKnown RBP eCLIP-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 MMDQ15546 238 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 SSX1Q16384 188 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 CEACAM21Q3KPI0 293 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 MRPL51Q4U2R6 128 aaKnown RBP-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 SPATA45Q537H7 98 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 GLT8D1Q68CQ7 371 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 NPSR1Q6W5P4 371 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 LINC00596Q86U02 117 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 C10orf67Q8IYJ2 551 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 CCDC89Q8N998 374 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 OR10T2Q8NGX3 314 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 KCTD4Q8WVF5 259 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 NCLNQ969V3 563 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 TBRG4Q969Z0 631 aaKnown RBP eCLIP-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 TESCQ96BS2 214 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 NRBF2Q96F24 287 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 PKNOX2Q96KN3 472 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 THUMPD2Q9BTF0 503 aaKnown RBP-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 PRR15LQ9BU68 103 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 ACAT2Q9BWD1 397 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 AGPAT5Q9NUQ2 364 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 MAD2L2Q9UI95 211 aa-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 NPHP4O75161 1426 aaPredicted RBP-2.88□□□□□ -2.87
SNORA40.16-201ENST00000517238 CFAP46Q8IYW2 2715 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 RFXANKO14593 260 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 GOSR2O14653 212 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 CLDN11O75508 207 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 EEDO75530 441 aaKnown RBP-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 CCNB2O95067 398 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 HSP90AA1P07900 732 aaKnown RBP-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 ASAH2BP0C7U1 165 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 PSMA2P25787 234 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 MLF1P58340 268 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 FXYD4P59646 89 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 HIST1H4AP62805 103 aaKnown RBP-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 KDSRQ06136 332 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 SNX1Q13596 522 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 DDX39BQ13838 428 aaKnown RBP-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 CLYBLQ8N0X4 340 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 OR2M3Q8NG83 312 aa-2.89□□□□□ -2.87
SNORA40.16-201ENST00000517238 OR1S1Q8NH92 325 aa-2.89□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms