RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 SOX2P48431 317 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 PPP3R1P63098 170 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 DGCR2P98153 550 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 MPV17LQ2QL34 196 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 Q3ZCU0 254 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 MOB3BQ86TA1 216 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 CBR4Q8N4T8 237 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 LINC00311Q8N616 119 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 OR51A2Q8NGJ7 313 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 OR2T10Q8NGZ9 312 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 METTL9Q9H1A3 318 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ABCG5Q9H222 651 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RAB9BQ9NP90 201 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 MRPS18AQ9NVS2 196 aaKnown RBP11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 FAM53CQ9NYF3 392 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ST3GAL6Q9Y274 331 aa11.51□□□□□ -0.57
SCARNA20.5-201ENST00000516991 NCBP2LA6PVI3 153 aaKnown RBP11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 CCL24O00175 119 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TXNL1O43396 289 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RRP9O43818 475 aaKnown RBP11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RAMP3O60896 148 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 GPR12P47775 334 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TMEM30BQ3MIR4 351 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 CCDC58Q4VC31 144 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 CXorf66Q5JRM2 361 aaPredicted RBP11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 C18orf65Q6ZTR6 163 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 Q8N6K4 173 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 OR8H1Q8NGG4 311 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 OR52I1Q8NGK6 324 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 OR8U1Q8NH10 309 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 OR52N1Q8NH53 320 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RHOXF1Q8NHV9 184 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ARL11Q969Q4 196 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TMEM106AQ96A25 262 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 S100A13Q99584 98 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TMEM138Q9NPI0 162 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 AASSQ9UDR5 926 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 LINC00527Q9UJ94 153 aa11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RPL36Q9Y3U8 105 aaKnown RBP11.5□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TRAV39A0A0B4J263 110 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 H3BNX3 289 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 SDCBPO00560 298 aaPredicted RBP11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ORC5O43913 435 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ZNF780AO75290 641 aaPredicted RBP11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 CD1BP29016 333 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 FOXE3Q13461 319 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 GPR50Q13585 617 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 PNLIPRP3Q17RR3 467 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 DDI2Q5TDH0 399 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RPL22L1Q6P5R6 122 aaKnown RBP11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 STX19Q8N4C7 294 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 Q8N9W7 124 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 OR5M8Q8NGP6 311 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 NEK7Q8TDX7 302 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RTN4IP1Q8WWV3 396 aaPredicted RBP11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RGP1Q92546 391 aaPredicted RBP11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RAX2Q96IS3 184 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 C9orf16Q9BUW7 83 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 GFOD1Q9NXC2 390 aa11.49□□□□□ -0.57
SCARNA20.5-201ENST00000516991 IGHV3-72A0A0B4J1Y9 119 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 A0A1W2PPE3 182 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 C15orf65H3BRN8 121 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 CDRT1O95170 752 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 MOSP00540 346 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ELANEP08246 267 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 NHLRC4P0CG21 123 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 BDKRB2P30411 391 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 REG1BP48304 166 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RAB25P57735 213 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 C9orf66Q5T8R8 295 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TMPRSS11AQ6ZMR5 421 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 C10orf67Q8IYJ2 551 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RNF152Q8N8N0 203 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TMEM104Q8NE00 496 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 SPACA1Q9HBV2 294 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 AMBNQ9NP70 447 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ING4Q9UNL4 249 aa11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 SIRT4Q9Y6E7 314 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20.5-201ENST00000516991 KMT2CQ8NEZ4 4911 aaKnown RBP11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 AIPO00170 330 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 GEMIN2O14893 280 aaKnown RBP11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RPLP1P05386 114 aaKnown RBP11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 LIMS3P0CW19 117 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 LIMS4P0CW20 117 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 GTF2F2P13984 249 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 SERPINA2P20848 420 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 CDX1P47902 265 aaPredicted RBP11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 GTF2A1P52655 376 aaPredicted RBP11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ZNF137PP52743 207 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 GPR176Q14439 515 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 KIR2DS1Q14954 304 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ATAD3CQ5T2N8 411 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ZNF497Q6ZNH5 498 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TFAP2CQ92754 450 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ST6GALNAC6Q969X2 333 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RASL11BQ9BPW5 248 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 DCLRE1BQ9H816 532 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 FGF20Q9NP95 211 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms