RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 LYRM9A8MSI8 78 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 DENRO43583 198 aaKnown RBP-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 VPS26AO75436 327 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 TRGC1P0CF51 173 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 CRHBPP24387 322 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 CD24P25063 80 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 RPL10AP62906 217 aaKnown RBP-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 MRPS22P82650 360 aaKnown RBP-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 RCN2Q14257 317 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 UQCC3Q6UW78 93 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR8B3Q8NGG8 313 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR51L1Q8NGJ5 315 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR4P4Q8NGL7 312 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 OR1S1Q8NH92 325 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 ZFAND1Q8TCF1 268 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 ZNF675Q8TD23 568 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 REEP6Q96HR9 211 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 FMO2Q99518 471 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 MND1Q9BWT6 205 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 CDCA4Q9BXL8 241 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 SLC5A7Q9GZV3 580 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 STMN4Q9H169 189 aaPredicted RBP-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 DNAJC27Q9NZQ0 273 aa-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 CFDP1Q9UEE9 299 aaPredicted RBP-3.21□□□□□ -2.92
RNU6-539P-201ENST00000516665 HEATR5AQ86XA9 2040 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 POLR3AO14802 1390 aaPredicted RBP-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 PNPLA6Q8IY17 1366 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 FAM170AA1A519 330 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 STX6O43752 255 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 PEX11AO75192 247 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 CD7P09564 240 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 HSPA5P11021 654 aaKnown RBP-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 IFNGR2P38484 337 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 MTPNP58546 118 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 STXBP1P61764 594 aaKnown RBP-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 YWHAHQ04917 246 aaPredicted RBP-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 CCDC70Q6NSX1 233 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 LYZL1Q6UWQ5 148 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 TMEM86AQ8N2M4 240 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 UBA3Q8TBC4 463 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 CCDC127Q96BQ5 260 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 PLEKHB2Q96CS7 222 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 YPEL4Q96NS1 127 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 NAP1L5Q96NT1 182 aaPredicted RBP-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 TGS1Q96RS0 853 aaKnown RBP-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 NDEL1Q9GZM8 345 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 PLEKHA1Q9HB21 404 aa-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 FGF20Q9NP95 211 aaPredicted RBP-3.22□□□□□ -2.92
RNU6-539P-201ENST00000516665 BCL9O00512 1426 aa-3.22□□□□□ -2.93
RNU6-539P-201ENST00000516665 HEATR1Q9H583 2144 aaKnown RBP-3.22□□□□□ -2.93
RNU6-539P-201ENST00000516665 SPG11Q96JI7 2443 aa-3.22□□□□□ -2.93
RNU6-539P-201ENST00000516665 KIF24Q5T7B8 1368 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 MYL12BO14950 172 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 IDH1O75874 414 aaKnown RBP-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 HPRT1P00492 218 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 SERPINE2P07093 398 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 HSMCR30P0CW71 290 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 HTR2AP28223 471 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 MAGEA2P43356 314 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 RAB7AP51149 207 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 CEACAM21Q3KPI0 293 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 PPM1LQ5SGD2 360 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 TPTE2P1Q5T6R2 138 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 UGT2A3Q6UWM9 527 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 CYP4Z2PQ8N1L4 340 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 CA13Q8N1Q1 262 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 NUBPLQ8TB37 319 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 SUN5Q8TC36 379 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 SKA1Q96BD8 255 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 TPD52L3Q96J77 140 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 PSKH2Q96QS6 385 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 SPACA1Q9HBV2 294 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 TMEM14CQ9P0S9 112 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 LGALS13Q9UHV8 139 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 PTBP2Q9UKA9 531 aaKnown RBP-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 NHSL1Q5SYE7 1610 aa-3.23□□□□□ -2.93
RNU6-539P-201ENST00000516665 PKD1P98161 4303 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 TLCD2A6NGC4 264 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 PSTPIP1O43586 416 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 FCN3O75636 299 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 DHRS3O75911 302 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 CCL3P10147 92 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 GRPRP30550 384 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 CASP2P42575 452 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 SERPINB10P48595 397 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 CCNHP51946 323 aaPredicted RBP-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 TSPEAR-AS2P59090 65 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 RPL37P61927 97 aaKnown RBP-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 BSPH1Q075Z2 132 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 MFSD4BQ5TF39 518 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 OR4F6Q8NGB9 312 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 OR4K2Q8NGD2 314 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 OR52B4Q8NGK2 314 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 SENP8Q96LD8 212 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 ACBD6Q9BR61 282 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 YIPF3Q9GZM5 350 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 ANKRD19PQ9H560 264 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 COMMD8Q9NX08 183 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 MED29Q9NX70 200 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 VAPAQ9P0L0 249 aa-3.24□□□□□ -2.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms