RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 UTF1Q5T230 341 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 SAMD5Q5TGI4 173 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 AWAT2Q6E213 333 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 GLIPR1L1Q6UWM5 242 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 AHSA2Q719I0 299 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 CDH26Q8IXH8 852 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 PGLYRP3Q96LB9 341 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 OR14A2Q96R54 314 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 PSORS1C1Q9UIG5 152 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 TRAPPC2LQ9UL33 140 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 TSSC4Q9Y5U2 329 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-215ENST00000515516 WNK1Q9H4A3 2382 aa10.9□□□□□ -0.66
TCOF1-215ENST00000515516 TRAV8-7A0A075B6U6 113 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 TRBV5-7A0A0A0MS05 114 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 SH2D7A6NKC9 451 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-215ENST00000515516 AIPO00170 330 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 CCRL2O00421 344 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 ORC5O43913 435 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 GAPDHP04406 335 aaKnown RBP10.89□□□□□ -0.67
TCOF1-215ENST00000515516 CELP19835 753 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 CD33P20138 364 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 RPS11P62280 158 aaKnown RBP eCLIP10.89□□□□□ -0.67
TCOF1-215ENST00000515516 DOC2BQ14184 412 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 HNF4GQ14541 408 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 KHDC1LQ5JSQ8 128 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 OGFRL1Q5TC84 451 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-215ENST00000515516 REC114Q7Z4M0 266 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 MOB3BQ86TA1 216 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 ZNF485Q8NCK3 441 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 OR52M1Q8NGK5 317 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 SGCDQ92629 289 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 PLCXD1Q9NUJ7 323 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 ETAA1Q9NY74 926 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 ZNF581Q9P0T4 197 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 VWFP04275 2813 aa10.89□□□□□ -0.67
TCOF1-215ENST00000515516 A0A1W2PP11 408 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 A0A1W2PPE3 182 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A18PA6NE21 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A16PA6NEW6 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A20PA6NIJ5 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A9PA6NNJ1 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 ADARB2-AS1A8MUL3 147 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A12PA8MX19 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A5PA8MXJ8 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 HSD17B6O14756 317 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 SPINT2O43291 252 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 CRTAPO75718 401 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-215ENST00000515516 PF4P02776 101 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 MT-ND4P03905 459 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 CD1AP06126 327 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 GNAO1P09471 354 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A15PP0C7V4 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A13PP0C7W8 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A14PP0C7W9 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A24PP0C7X0 464 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 C6orf183Q5T699 404 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 KPRPQ5T749 579 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-215ENST00000515516 RAB12Q6IQ22 244 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 ZNF497Q6ZNH5 498 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 NKAIN3Q8N8D7 197 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 MYDGFQ969H8 173 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 DERL3Q96Q80 235 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 SELENOIQ9C0D9 397 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 GFOD1Q9NXC2 390 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 PEX16Q9Y5Y5 336 aa10.88□□□□□ -0.67
TCOF1-215ENST00000515516 A0A1W2PPI3 338 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 PSMB11A5LHX3 300 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 MAGEA13PA6NCF6 341 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 C15orf65H3BRN8 121 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 CASQ2O14958 399 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-215ENST00000515516 IGKV1D-33P01593 117 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 IGKV1-33P01594 117 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 AMY1AP04745 511 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 AMY2AP04746 511 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 DIAPH2-AS1Q14236 149 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 TMEM30BQ3MIR4 351 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 FBLN7Q53RD9 439 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 OXLD1Q5BKU9 147 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 SYT6Q5T7P8 510 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-215ENST00000515516 TRAT1Q6PIZ9 186 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 MS4A15Q8N5U1 240 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 NANOGP1Q8N7R0 232 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 UBALD1Q8TB05 177 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 UQCC2Q9BRT2 126 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 MND1Q9BWT6 205 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 BANF2Q9H503 90 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 GNG12Q9UBI6 72 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 GHRLQ9UBU3 117 aa10.87□□□□□ -0.67
TCOF1-215ENST00000515516 IGHV3-43A0A0B4J1X8 118 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 IGHV1-3A0A0C4DH29 117 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A10PA6NDY2 464 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A7PA6NKC0 464 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 NCBP2LA6PVI3 153 aaKnown RBP10.86□□□□□ -0.67
TCOF1-215ENST00000515516 SERPINE3A8MV23 424 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 FAM90A23PA8MXZ1 464 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 FGF16O43320 207 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 CA11O75493 328 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 GLAP06280 429 aa10.86□□□□□ -0.67
TCOF1-215ENST00000515516 IGHV3-43DP0DP04 118 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms