RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 BANF2Q9H503 90 aa19.62■□□□□ 0.73
SNF8-213ENST00000514929 TPRKBQ9Y3C4 175 aa19.62■□□□□ 0.73
SNF8-213ENST00000514929 ERICH4A6NGS2 130 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 WIPF1O43516 503 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 CRTAPO75718 401 aaPredicted RBP19.61■□□□□ 0.73
SNF8-213ENST00000514929 MGMTP16455 207 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 VDAC2P45880 294 aaPredicted RBP19.61■□□□□ 0.73
SNF8-213ENST00000514929 MADCAM1Q13477 382 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 ZNF497Q6ZNH5 498 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 LYPD6Q86Y78 171 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 ARL11Q969Q4 196 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 UQCC2Q9BRT2 126 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 SELENOIQ9C0D9 397 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 VCX3BQ9H321 246 aa19.61■□□□□ 0.73
SNF8-213ENST00000514929 RCC2Q9P258 522 aaKnown RBP19.61■□□□□ 0.73
SNF8-213ENST00000514929 LSM2Q9Y333 95 aaKnown RBP19.61■□□□□ 0.73
SNF8-213ENST00000514929 H0YHG0 523 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 AIPO00170 330 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 FBXO24O75426 580 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 MT-ND4P03905 459 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 MYF6P23409 242 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 SLC35A2P78381 396 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 DEFA6Q01524 100 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 RAB12Q6IQ22 244 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 UNQ9370/PRO34162Q6UXP9 181 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 OR10X1Q8NGY0 326 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 RBM14Q96PK6 669 aaKnown RBP19.6■□□□□ 0.73
SNF8-213ENST00000514929 ETAA1Q9NY74 926 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 PEX16Q9Y5Y5 336 aa19.6■□□□□ 0.73
SNF8-213ENST00000514929 OR2F2O95006 317 aa19.59■□□□□ 0.73
SNF8-213ENST00000514929 GPR50Q13585 617 aa19.59■□□□□ 0.73
SNF8-213ENST00000514929 TMEM95Q3KNT9 176 aa19.59■□□□□ 0.73
SNF8-213ENST00000514929 RBM48Q5RL73 367 aaKnown RBP19.59■□□□□ 0.73
SNF8-213ENST00000514929 FAM27D1Q5T7N8 215 aa19.59■□□□□ 0.73
SNF8-213ENST00000514929 TMEM104Q8NE00 496 aa19.59■□□□□ 0.73
SNF8-213ENST00000514929 UBALD1Q8TB05 177 aa19.59■□□□□ 0.73
SNF8-213ENST00000514929 CMYA5Q8N3K9 4069 aa19.58■□□□□ 0.73
SNF8-213ENST00000514929 A0A1W2PPE3 182 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A10PA6NDY2 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A18PA6NE21 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A16PA6NEW6 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A20PA6NIJ5 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A7PA6NKC0 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A12PA8MX19 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A5PA8MXJ8 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A23PA8MXZ1 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 C15orf65H3BRN8 121 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 SDCBPO00560 298 aaPredicted RBP19.58■□□□□ 0.72
SNF8-213ENST00000514929 KCNAB3O43448 404 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 ORC5O43913 435 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A15PP0C7V4 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A13PP0C7W8 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A14PP0C7W9 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A24PP0C7X0 464 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM106CPP0CH98 169 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 CD28P10747 220 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 IRF3Q14653 427 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FBLN7Q53RD9 439 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 UFD1Q92890 307 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 FAM46BQ96A09 425 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 ANKRD60Q9BZ19 345 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 WNT10AQ9GZT5 417 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 CST11Q9H112 138 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 GHRLQ9UBU3 117 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 TRAPPC2LQ9UL33 140 aa19.58■□□□□ 0.72
SNF8-213ENST00000514929 RGS10O43665 173 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 VHLP40337 213 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 RAB7AP51149 207 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 GP2P55259 537 aaKnown RBP19.57■□□□□ 0.72
SNF8-213ENST00000514929 ABCA11PQ4W5N1 156 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 HSD17B12Q53GQ0 312 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 CEACAM19Q7Z692 300 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 LYG1Q8N1E2 194 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 OR52M1Q8NGK5 317 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 OR56B4Q8NH76 319 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 PHYHIPQ92561 330 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 Q96M66 194 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 CCDC90BQ9GZT6 254 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 DUSP21Q9H596 190 aa19.57■□□□□ 0.72
SNF8-213ENST00000514929 FUT3P21217 361 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 DIAPH2-AS1Q14236 149 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 NSUN5P1Q3KNT7 163 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 SYT6Q5T7P8 510 aaPredicted RBP19.56■□□□□ 0.72
SNF8-213ENST00000514929 LIPKQ5VXJ0 399 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 GLT8D1Q68CQ7 371 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 LRRTM1Q86UE6 522 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 OR8H3Q8N146 312 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 DRAM1Q8N682 238 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 OR4K15Q8NH41 348 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 OCSTAMPQ9BR26 566 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 RAB9BQ9NP90 201 aa19.56■□□□□ 0.72
SNF8-213ENST00000514929 IGHV3-43A0A0B4J1X8 118 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 A0A1W2PPI3 338 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 SNRNP70P08621 437 aaKnown RBP19.55■□□□□ 0.72
SNF8-213ENST00000514929 UBBP0CG47 229 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 HSMCR30P0CW71 290 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 IGHV3-43DP0DP04 118 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 HES1Q14469 280 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 C6orf183Q5T699 404 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 IZUMO2Q6UXV1 221 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms