RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 IGHV2-26A0A0B4J1V2 119 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 A0A0U1RQK1 487 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 A0A1B0GX30 115 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 A0A1W2PRD5 423 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 A0A1W2PRF3 423 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 A0A1W2PRM7 423 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 SMIM30A4D0T7 59 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 FOXI3A8MTJ6 420 aaPredicted RBP11.62□□□□□ -0.55
NUP54-216ENST00000514901 CLDN34H7C241 214 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 TRIM77I1YAP6 450 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 SCGNO76038 276 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 PAHP00439 452 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 ARG1P05089 322 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 CLEC2LP0C7M8 214 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 CD34P28906 385 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 SAA4P35542 130 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 LSM3P62310 102 aaKnown RBP11.62□□□□□ -0.55
NUP54-216ENST00000514901 BAMBIQ13145 260 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 ARL6IP1Q15041 203 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 TMEM30BQ3MIR4 351 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 IDNKQ5T6J7 187 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 ZNF626Q68DY1 528 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 Q6YL49 198 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 C6orf201Q7Z4U5 140 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 ABHD12Q8N2K0 398 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 TMEM86BQ8N661 226 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 ZNF596Q8TC21 504 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 CCDC107Q8WV48 283 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 ARL11Q969Q4 196 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 SULT4A1Q9BR01 284 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 KCNIP1Q9NZI2 227 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 TBL2Q9Y4P3 447 aaKnown RBP11.62□□□□□ -0.55
NUP54-216ENST00000514901 ETV7Q9Y603 341 aa11.62□□□□□ -0.55
NUP54-216ENST00000514901 SOX21Q9Y651 276 aaPredicted RBP11.62□□□□□ -0.55
NUP54-216ENST00000514901 A0A0B4J203 849 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 ODF3BA8MYP8 253 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 SPINT2O43291 252 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 MMP23AO75900 390 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 VENTXO95231 258 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 OMGP23515 440 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 RPS19P39019 145 aaKnown RBP11.61□□□□□ -0.55
NUP54-216ENST00000514901 RPL5P46777 297 aaKnown RBP11.61□□□□□ -0.55
NUP54-216ENST00000514901 PRRX1P54821 245 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 TMEM50BP56557 158 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 DYNC1I2Q13409 638 aaKnown RBP11.61□□□□□ -0.55
NUP54-216ENST00000514901 MINOS1Q5TGZ0 78 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 LDLRAD3Q86YD5 345 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 OR52M1Q8NGK5 317 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 OR10R2Q8NGX6 335 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 OR4K15Q8NH41 348 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 MRPL30Q8TCC3 161 aaKnown RBP11.61□□□□□ -0.55
NUP54-216ENST00000514901 SSMEM1Q8WWF3 244 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 TMEM158Q8WZ71 300 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 DYRK2Q92630 601 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 CREB3L1Q96BA8 519 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 RAB3CQ96E17 227 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 MALSU1Q96EH3 234 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 KIRREL1Q96J84 757 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 MBNL3Q9NUK0 354 aaKnown RBP11.61□□□□□ -0.55
NUP54-216ENST00000514901 ABRACLQ9P1F3 81 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 MGAT4AQ9UM21 535 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 MINOS1-NBL1R4GNA1 71 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 COL6A5A8TX70 2615 aa11.61□□□□□ -0.55
NUP54-216ENST00000514901 TRBV6-6A0A0A6YYG2 114 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 TRAV39A0A0B4J263 110 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 C15orf65H3BRN8 121 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 RAB27BO00194 218 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 TOR1AO14656 332 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 GABARAPO95166 117 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 SNRPBP14678 240 aaKnown RBP11.6□□□□□ -0.55
NUP54-216ENST00000514901 NFYBP25208 207 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 SSTR5P35346 364 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 SERPINB10P48595 397 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 EFNB2P52799 333 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 PLA2G7Q13093 441 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 AANATQ16613 207 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 GPR107Q5VW38 600 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 MOB1BQ7L9L4 216 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 ZDHHC22Q8N966 263 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 BEND2Q8NDZ0 799 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 RFESDQ8TAC1 157 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 SLC25A46Q96AG3 418 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 ARHGAP5-AS1Q96IT6 56 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 PECRQ9BY49 303 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 MEGF9Q9H1U4 602 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 ATG5Q9H1Y0 275 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 DPAGT1Q9H3H5 408 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 CHMP1AQ9HD42 196 aaPredicted RBP11.6□□□□□ -0.55
NUP54-216ENST00000514901 SCOCQ9UIL1 159 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 POMT1Q9Y6A1 747 aa11.6□□□□□ -0.55
NUP54-216ENST00000514901 MDFIC2A0A1B0GVS7 189 aa11.59□□□□□ -0.55
NUP54-216ENST00000514901 SERPINE3A8MV23 424 aa11.59□□□□□ -0.55
NUP54-216ENST00000514901 F2RL2O00254 374 aa11.59□□□□□ -0.55
NUP54-216ENST00000514901 NAPSAO96009 420 aa11.59□□□□□ -0.55
NUP54-216ENST00000514901 MELTFP08582 738 aa11.59□□□□□ -0.55
NUP54-216ENST00000514901 RCC1P18754 421 aaPredicted RBP11.59□□□□□ -0.55
NUP54-216ENST00000514901 HTR1DP28221 377 aa11.59□□□□□ -0.55
NUP54-216ENST00000514901 TGFBR1P36897 503 aa11.59□□□□□ -0.55
NUP54-216ENST00000514901 GDNFP39905 211 aa11.59□□□□□ -0.55
NUP54-216ENST00000514901 VBP1P61758 197 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms