RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 FAM216AQ8WUB2 273 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 LRRC29Q8WV35 223 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 RTN4IP1Q8WWV3 396 aaPredicted RBP7.04□□□□□ -1.28
RNF4-220ENST00000513578 LRRC46Q96FV0 321 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 LURAP1Q96LR2 239 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 C2orf50Q96LR7 162 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 OR2V2Q96R30 315 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 SLC2A9Q9NRM0 540 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 COMMD9Q9P000 198 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 HCFC1P51610 2035 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 TLN1Q9Y490 2541 aaKnown RBP7.04□□□□□ -1.28
RNF4-220ENST00000513578 PLCE1Q9P212 2302 aa7.04□□□□□ -1.28
RNF4-220ENST00000513578 PRRC2CQ9Y520 2896 aaKnown RBP7.03□□□□□ -1.28
RNF4-220ENST00000513578 DSCAMO60469 2012 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 KIAA2026Q5HYC2 2103 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 PCNX1Q96RV3 2341 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 A0A0D9SG52 128 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 TEX13DA0A0J9YY54 714 aaPredicted RBP7.03□□□□□ -1.28
RNF4-220ENST00000513578 DUXBA0A1W2PPF3 345 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 OOEPA6NGQ2 149 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 L7N2F9 121 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 ERVH48-1M5A8F1 160 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 GPR31O00270 319 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 CCL21O00585 134 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 ABCD4O14678 606 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 WNT9BO14905 357 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 PSPNO60542 156 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 ZNF737O75373 536 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 IGHV1-46P01743 117 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 HEXAP06865 529 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 RCC1P18754 421 aaPredicted RBP7.03□□□□□ -1.28
RNF4-220ENST00000513578 CXCL2P19875 107 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 GNRHRP30968 328 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 OR3A1P47881 315 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 SRPXP78539 464 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 BSPH1Q075Z2 132 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 OPCMLQ14982 345 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 SLC9A3R2Q15599 337 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 ADIPOQQ15848 244 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 CR1LQ2VPA4 569 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 C6orf183Q5T699 404 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 LIAT1Q6ZQX7 453 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 OR10J5Q8NHC4 309 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 TOMM40LQ969M1 308 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 KIRREL1Q96J84 757 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 AKR1E2Q96JD6 320 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 C18orf12Q96KH6 178 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 SNX22Q96L94 193 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 WFIKKN1Q96NZ8 548 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 PDCD10Q9BUL8 212 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 ESRP2Q9H6T0 727 aaKnown RBP7.03□□□□□ -1.28
RNF4-220ENST00000513578 UFSP2Q9NUQ7 469 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 COQ3Q9NZJ6 369 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 RNF7Q9UBF6 113 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 SH3BGRL2Q9UJC5 107 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 TNFSF18Q9UNG2 199 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 OR2W1Q9Y3N9 320 aa7.03□□□□□ -1.28
RNF4-220ENST00000513578 CELSR3Q9NYQ7 3312 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 hCG_1807616A0A1W2PRN6 198 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 C17orf100A8MU93 164 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 M0R233 179 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 HSPB6O14558 160 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 CCSO14618 274 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 MGST3O14880 152 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 MPPED1O15442 326 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 OR2F2O95006 317 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 MPC2O95563 127 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 IFNA21P01568 189 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 PSG2P11465 335 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 EGR1P18146 543 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 TNFRSF1AP19438 455 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 PSMB6P28072 239 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 S100A11P31949 105 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 PRDX2P32119 198 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 FXYD4P59646 89 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 SNRPD2P62316 118 aaKnown RBP7.02□□□□□ -1.29
RNF4-220ENST00000513578 ADORA2A-AS1P86434 159 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 TNFAIP6P98066 277 aaPredicted RBP7.02□□□□□ -1.29
RNF4-220ENST00000513578 COL10A1Q03692 680 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 OR2F1Q13607 317 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 TESK1Q15569 626 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 EFNB3Q15768 340 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 FAM209AQ5JX71 171 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 TEX261Q6UWH6 196 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 TMUB2Q71RG4 321 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 LGI3Q8N145 548 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 CD177Q8N6Q3 437 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 ZNF565Q8N9K5 539 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 ZBTB34Q8NCN2 500 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 BVESQ8NE79 360 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 OR5T2Q8NGG2 359 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 OR11L1Q8NGX0 322 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 THAP6Q8TBB0 222 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 GLYATL2Q8WU03 294 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 PPP1R1CQ8WVI7 109 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 ITLN1Q8WWA0 313 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 IL22RA2Q969J5 263 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 MSI2Q96DH6 328 aaKnown RBP7.02□□□□□ -1.29
RNF4-220ENST00000513578 SDSLQ96GA7 329 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 COQ2Q96H96 371 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms