RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ZNF708P17019 499 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 OR10G3Q8NGC4 313 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 OR4A4PQ8NGN8 299 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 AMELYQ99218 206 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 RTL8AQ9BWD3 113 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 THY1P04216 161 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 UCNP55089 124 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 RUNX1Q01196 453 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 ROM1Q03395 351 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 CEBPEQ15744 281 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 COX19Q49B96 90 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 RHBDD2Q6NTF9 364 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 TMEM252Q8N6L7 170 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 GNRHR2Q96P88 292 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 FAM173AQ9BQD7 235 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF732B4DXR9 585 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 C11orf94C9JXX5 98 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 GYPAP02724 150 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 B4GALT1P15291 398 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 UBE2G1P62253 170 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 RPEL1Q2QD12 228 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 LINC01590Q5TEZ4 76 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 PET117Q6UWS5 81 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 PCGF1Q9BSM1 259 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 STARD10Q9Y365 291 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 NKX6-3A6NJ46 265 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 SHISA8B8ZZ34 492 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 SPINK4O60575 86 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 GFRA3O60609 400 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 NUBP1P53384 320 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 PMS2CLQ68D20 193 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 ANKRD37Q7Z713 158 aa9.86□□□□□ -0.83
TCOF1-211ENST00000513346 ALKBH3Q96Q83 286 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-211ENST00000513346 DIRC3C9JPN6 131 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 CHEK1O14757 476 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 TOX3O15405 576 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-211ENST00000513346 PPYP01298 95 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 LEMD1Q68G75 181 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 DGAT2L6Q6ZPD8 337 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 PTPMT1Q8WUK0 201 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-211ENST00000513346 CLDN23Q96B33 292 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 ERRFI1Q9UJM3 462 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-211ENST00000513346 TRPM7Q96QT4 1865 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 MYO16Q9Y6X6 1858 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 IGHV3-64DA0A0J9YX35 117 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 MEX3AA1L020 520 aaKnown RBP9.85□□□□□ -0.83
TCOF1-211ENST00000513346 SPINT2O43291 252 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 OR7C2O60412 319 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 ZIC2O95409 532 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-211ENST00000513346 MELTFP08582 738 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 SELEP16581 610 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 AGAP20933 346 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 SRP14P37108 136 aaKnown RBP9.85□□□□□ -0.83
TCOF1-211ENST00000513346 MYBPHQ13203 477 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 CEACAM16Q2WEN9 425 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 HES3Q5TGS1 186 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 SFTPA2Q8IWL1 248 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 CISD2Q8N5K1 135 aaKnown RBP9.85□□□□□ -0.83
TCOF1-211ENST00000513346 ASB10Q8WXI3 467 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 GALNT14Q96FL9 552 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 TMEM147Q9BVK8 224 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 FAM234AQ9H0X4 552 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 TRGV5A0A0B4J1U4 118 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 CYR61O00622 381 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF205O95201 554 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 CD99P14209 185 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 BIVMQ86UB2 503 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 MYPOPQ86VE0 399 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-211ENST00000513346 ARL6IP6Q8N6S5 226 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 P2RX4Q99571 388 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 SH3BGRL3Q9H299 93 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 SRD5A3Q9H8P0 318 aa9.85□□□□□ -0.83
TCOF1-211ENST00000513346 AQP7P3A6NL99 342 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 LINC01387J3KSC0 135 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 BGLAPP02818 100 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 ASAH2BP0C7U1 165 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 GPX4P36969 197 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 SSPNQ14714 243 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 C16orf47Q6ZP98 133 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 WFDC8Q8IUA0 241 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 HSPB9Q9BQS6 159 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 TUBD1Q9UJT1 453 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 POLDIP2Q9Y2S7 368 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 A0A087WWC5 75 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 J3QRE1 110 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 ENSAO43768 121 aaKnown RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 CRYABP02511 175 aaKnown RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 ERGP11308 486 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 SERF2P84101 59 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 MGAT2Q10469 447 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 ELOBQ15370 118 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 DMRTA1Q5VZB9 504 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 FDX2Q6P4F2 183 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 RNASEKQ6P5S7 137 aaKnown RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF573Q86YE8 665 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 RBMXL3Q8N7X1 1067 aaKnown RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 OR4B1Q8NGF8 309 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 ATP23Q9Y6H3 246 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 PIEZO1Q92508 2521 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 LOC102723971A0A1B0GUV8 181 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms