RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 EPHA1P21709 976 aa17.18■□□□□ 0.34
NEIL3-202ENST00000513321 HCP5Q6MZN7 132 aa17.18■□□□□ 0.34
NEIL3-202ENST00000513321 BRD3OSQ6XYD6 125 aa17.18■□□□□ 0.34
NEIL3-202ENST00000513321 SAMD12Q8N8I0 201 aa17.18■□□□□ 0.34
NEIL3-202ENST00000513321 RFESDQ8TAC1 157 aa17.18■□□□□ 0.34
NEIL3-202ENST00000513321 ACOT12Q8WYK0 555 aa17.18■□□□□ 0.34
NEIL3-202ENST00000513321 C22orf15Q8WYQ4 148 aa17.18■□□□□ 0.34
NEIL3-202ENST00000513321 RBM38Q9H0Z9 239 aaKnown RBP17.18■□□□□ 0.34
NEIL3-202ENST00000513321 ZMAT3Q9HA38 289 aaKnown RBP17.18■□□□□ 0.34
NEIL3-202ENST00000513321 COMMD3Q9UBI1 195 aa17.18■□□□□ 0.34
NEIL3-202ENST00000513321 SCGNO76038 276 aa17.17■□□□□ 0.34
NEIL3-202ENST00000513321 NAPSAO96009 420 aa17.17■□□□□ 0.34
NEIL3-202ENST00000513321 HIST1H1DP16402 221 aaKnown RBP17.17■□□□□ 0.34
NEIL3-202ENST00000513321 SSTR5P35346 364 aa17.17■□□□□ 0.34
NEIL3-202ENST00000513321 GUCA2AQ02747 115 aa17.17■□□□□ 0.34
NEIL3-202ENST00000513321 RUSC1-AS1Q66K80 236 aa17.17■□□□□ 0.34
NEIL3-202ENST00000513321 PHF21AQ96BD5 680 aa17.17■□□□□ 0.34
NEIL3-202ENST00000513321 HDHD3Q9BSH5 251 aaPredicted RBP17.17■□□□□ 0.34
NEIL3-202ENST00000513321 MS4A7Q9GZW8 240 aaPredicted RBP17.17■□□□□ 0.34
NEIL3-202ENST00000513321 LINC00574Q9H8X3 128 aa17.17■□□□□ 0.34
NEIL3-202ENST00000513321 CHMP1AQ9HD42 196 aaPredicted RBP17.17■□□□□ 0.34
NEIL3-202ENST00000513321 SESN1Q9Y6P5 492 aa17.17■□□□□ 0.34
NEIL3-202ENST00000513321 SETD2Q9BYW2 2564 aaPredicted RBP17.17■□□□□ 0.34
NEIL3-202ENST00000513321 A0A1W2PRD5 423 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 A0A1W2PRF3 423 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 A0A1W2PRM7 423 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 NPIPB11E5RHQ5 1161 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 MFNGO00587 321 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 COX7A1P24310 79 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 GDNFP39905 211 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 UBE2E1P51965 193 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 BPIFB3P59826 476 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 DYNC1I2Q13409 638 aaKnown RBP17.16■□□□□ 0.34
NEIL3-202ENST00000513321 CDNFQ49AH0 187 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 BCL6BQ8N143 479 aaPredicted RBP17.16■□□□□ 0.34
NEIL3-202ENST00000513321 PNKDQ8N490 385 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 DYNC2LI1Q8TCX1 351 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 ARL11Q969Q4 196 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 CMSS1Q9BQ75 279 aaKnown RBP17.16■□□□□ 0.34
NEIL3-202ENST00000513321 ABCG5Q9H222 651 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 RIMS4Q9H426 269 aaPredicted RBP17.16■□□□□ 0.34
NEIL3-202ENST00000513321 MBNL3Q9NUK0 354 aaKnown RBP17.16■□□□□ 0.34
NEIL3-202ENST00000513321 SOX21Q9Y651 276 aaPredicted RBP17.16■□□□□ 0.34
NEIL3-202ENST00000513321 MXRA5Q9NR99 2828 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 C15orf65H3BRN8 121 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 ORC5O43913 435 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 FPR2P25090 351 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 SOX6P35712 828 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 SCGB2A2Q13296 93 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 UBE2NLQ5JXB2 153 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 C6orf183Q5T699 404 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 OR52W1Q6IF63 320 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 BAIAP2L2Q6UXY1 529 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 OR13D1Q8NGV5 346 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 UBALD1Q8TB05 177 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 AP3S1Q92572 193 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 S100A16Q96FQ6 103 aaKnown RBP17.16■□□□□ 0.34
NEIL3-202ENST00000513321 SUCNR1Q9BXA5 334 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 TMEM133Q9H2Q1 129 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 DIABLOQ9NR28 239 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 IDI2-AS1Q9NZ38 188 aa17.16■□□□□ 0.34
NEIL3-202ENST00000513321 C12orf77C9JDV5 145 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 CD3GP09693 182 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 ARL6IP1Q15041 203 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 LTC4SQ16873 150 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 MZT2AQ6P582 158 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 TRAT1Q6PIZ9 186 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 PIP4P2Q8N4L2 257 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 SETD6Q8TBK2 473 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 KIRREL1Q96J84 757 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 TAF9BQ9HBM6 251 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 C12orf4Q9NQ89 552 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 KCNIP1Q9NZI2 227 aa17.15■□□□□ 0.34
NEIL3-202ENST00000513321 RSL24D1Q9UHA3 163 aaKnown RBP17.15■□□□□ 0.34
NEIL3-202ENST00000513321 TRAV18A0A075B6X5 111 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 A0A0A6YYH2 397 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 A6NJ64 397 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 SERPINE3A8MV23 424 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 NPFFO15130 113 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 NFYBP25208 207 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 MRPS15P82914 257 aaKnown RBP17.14■□□□□ 0.33
NEIL3-202ENST00000513321 ZNF880Q6PDB4 577 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 Q6ZPA2 131 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 C9orf139Q6ZV77 190 aa17.14■□□□□ 0.33
NEIL3-202ENST00000513321 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.14■□□□□ 0.33
NEIL3-202ENST00000513321 ELF5Q9UKW6 265 aaPredicted RBP17.14■□□□□ 0.33
NEIL3-202ENST00000513321 TRBV6-6A0A0A6YYG2 114 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 SPINT2O43291 252 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 ARFRP1Q13795 201 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 ZNF260Q3ZCT1 412 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 C5orf24Q7Z6I8 188 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 PRR18Q8N4B5 295 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 OR11H6Q8NGC7 330 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 OR10A7Q8NGE5 316 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 OCEL1Q9H607 264 aa17.13■□□□□ 0.33
NEIL3-202ENST00000513321 SMIM31A0A1B0GVY4 71 aa17.12■□□□□ 0.33
NEIL3-202ENST00000513321 DPPA5A6NC42 116 aa17.12■□□□□ 0.33
NEIL3-202ENST00000513321 FAM172BPA6NC97 362 aa17.12■□□□□ 0.33
NEIL3-202ENST00000513321 ZNF701M0R085 212 aaPredicted RBP17.12■□□□□ 0.33
NEIL3-202ENST00000513321 HPGDSO60760 199 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms