RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 ZNF345Q14585 488 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 ABCA11PQ4W5N1 156 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 PAN3Q58A45 887 aaKnown RBP11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 TEX261Q6UWH6 196 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 Q6ZR03 302 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 KCTD9Q7L273 389 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 C11orf53Q8IXP5 236 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 NUP37Q8NFH4 326 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 VKORC1Q9BQB6 163 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 CABLES2Q9BTV7 478 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 NAA60Q9H7X0 242 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 ASF1BQ9NVP2 202 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 MEMO1Q9Y316 297 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 U3KQ87 197 aa11.08□□□□□ -0.64
DEPDC1B-206ENST00000512452 FXYD6-FXYD2A0A087WZ82 144 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 TEX13DA0A0J9YY54 714 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 TUBAL3A6NHL2 446 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 H0YL77 283 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 SLC33A1O00400 549 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 OR2F2O95006 317 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 OR2H2O95918 312 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 GRPP07492 148 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 FOSL1P15407 271 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 PI3P19957 117 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 BMP5P22003 454 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 AADACP22760 399 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 PTAFRP25105 342 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 SERPINF1P36955 418 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 PIGPP57054 158 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 SRPXP78539 464 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 SORDQ00796 357 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 OR2F1Q13607 317 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 SLC9A3R2Q15599 337 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 ANKRD55Q3KP44 614 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 ZNF497Q6ZNH5 498 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 BATF2Q8N1L9 274 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 LRTM2Q8N967 370 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 OR8H1Q8NGG4 311 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 LILRB1Q8NHL6 650 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 THAP6Q8TBB0 222 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 WDR89Q96FK6 387 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 C2orf50Q96LR7 162 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 LIME1Q9H400 295 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 TMEM165Q9HC07 324 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 WIPI2Q9Y4P8 454 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 POLEQ07864 2286 aa11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 PRRC2AP48634 2157 aaKnown RBP11.07□□□□□ -0.64
DEPDC1B-206ENST00000512452 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 C5orf51A6NDU8 294 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 CCSO14618 274 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 ARPC5O15511 151 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 TSC22D2O75157 780 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 B3GALNT1O75752 331 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 HAND1O96004 215 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 IFNA21P01568 189 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 S100A1P23297 94 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 CD40P25942 277 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 PSMB6P28072 239 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 DUSP1P28562 367 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 CASP6P55212 293 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 PAX5Q02548 391 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 FAM27E3Q08E93 113 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 SMIM21Q3B7S5 101 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 ESCO2Q56NI9 601 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 TMEM108Q6UXF1 575 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 WDR82Q6UXN9 313 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 ACP7Q6ZNF0 438 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 TMUB2Q71RG4 321 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 ZNF546Q86UE3 836 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 ZNF680Q8NEM1 530 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 LILRB4Q8NHJ6 448 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 TMEM171Q8WVE6 324 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 PPP1R1CQ8WVI7 109 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 RND1Q92730 232 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 RDH5Q92781 318 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 DMRTA2Q96SC8 542 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 MFFQ9GZY8 342 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 SLC2A9Q9NRM0 540 aa11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 MBNL3Q9NUK0 354 aaKnown RBP11.06□□□□□ -0.64
DEPDC1B-206ENST00000512452 A6NLC8 198 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 FAM25EA8MYX2 175 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 HS3ST1O14792 307 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 RP2O75695 350 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 MPC2O95563 127 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 WNT2P09544 360 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 PET100P0DJ07 73 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 LYL1P12980 280 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 CCKARP32238 428 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 GATA4P43694 442 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 TMEM187Q14656 261 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 SLC35E4Q6ICL7 350 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 KCNRGQ8N5I3 272 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 ZNF565Q8N9K5 539 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 RTN4IP1Q8WWV3 396 aaPredicted RBP11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 TOMM40LQ969M1 308 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 ZFP57Q9NU63 452 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 TAAR3PQ9P1P4 343 aa11.05□□□□□ -0.64
DEPDC1B-206ENST00000512452 TNFSF18Q9UNG2 199 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms