RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 TP53I11O14683 189 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 MMP23AO75900 390 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 CA2P00918 260 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 IGLL1P15814 213 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 ZBTB25P24278 435 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 IL2RGP31785 369 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 APLNRP35414 380 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 HMGA2P52926 109 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 ERVK-16P61578 105 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 LAMTOR4Q0VGL1 99 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 SLC10A1Q14973 349 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 C11orf71Q6IPW1 123 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 Q6ZRP5 223 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 PIP4P1Q86T03 277 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 OR2M4Q96R27 311 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 LINC01587Q99440 93 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 FAIMQ9NVQ4 179 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 SSR3Q9UNL2 185 aa4.84□□□□□ -1.63
CHD1-208ENST00000512392 DNMT1P26358 1616 aaKnown RBP4.84□□□□□ -1.64
CHD1-208ENST00000512392 IBTKQ9P2D0 1353 aaPredicted RBP4.84□□□□□ -1.64
CHD1-208ENST00000512392 TRAV26-2A0A0B4J265 109 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 IQCMA0A1B0GVH7 501 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 AGPAT2O15120 278 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 SUPT7LO94864 414 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 CDRT1O95170 752 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 ERGP11308 486 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 LHX2P50458 406 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 TAS2R46P59540 309 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 SELENOTP62341 195 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 PLCXD2Q0VAA5 305 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 RGNQ15493 299 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 CENPWQ5EE01 88 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 AVPI1Q5T686 147 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 C10orf25Q5T742 122 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 DNAJC24Q6P3W2 148 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 ZNF613Q6PF04 617 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 YTHDF3Q7Z739 585 aaKnown RBP4.84□□□□□ -1.64
CHD1-208ENST00000512392 TMEM179BQ7Z7N9 219 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 C17orf82Q86X59 251 aaPredicted RBP4.84□□□□□ -1.64
CHD1-208ENST00000512392 ZNF283Q8N7M2 679 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 OR11H7Q8NGC8 314 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 JOSD2Q8TAC2 188 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 NPRL2Q8WTW4 380 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 CANT1Q8WVQ1 401 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 FCRL1Q96LA6 429 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 ZNF331Q9NQX6 463 aaPredicted RBP4.84□□□□□ -1.64
CHD1-208ENST00000512392 RARRES3Q9UL19 164 aa4.84□□□□□ -1.64
CHD1-208ENST00000512392 TRAV36DV7A0A075B6V5 113 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 A0A0B4J2A0 478 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 IGHV3OR16-9A0A0B4J2B5 98 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 TMEM189A5PLL7 270 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 C5orf63A6NC05 138 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 J3KT08 172 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 K7ERU9 68 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 LYPLA1O75608 230 aaPredicted RBP4.83□□□□□ -1.64
CHD1-208ENST00000512392 SPI1P17947 270 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 IGHV1-2P23083 117 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 KDELR1P24390 212 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 BLVRBP30043 206 aaPredicted RBP4.83□□□□□ -1.64
CHD1-208ENST00000512392 HLA-DRB3P79483 266 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 C17orf58Q2M2W7 97 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 CLEC19AQ6UXS0 136 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 CLEC20AQ6ZU45 233 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 LINC00337Q8N6G1 96 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 OR11H6Q8NGC7 330 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 RPUSD4Q96CM3 377 aaKnown RBP4.83□□□□□ -1.64
CHD1-208ENST00000512392 SLC25A44Q96H78 314 aaPredicted RBP4.83□□□□□ -1.64
CHD1-208ENST00000512392 SMIM8Q96KF7 97 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 LYSMD1Q96S90 227 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 KLF6Q99612 283 aaPredicted RBP4.83□□□□□ -1.64
CHD1-208ENST00000512392 PRSS27Q9BQR3 290 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 PBDC1Q9BVG4 233 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 TMEM147Q9BVK8 224 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 LPAR5Q9H1C0 372 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 OR51I2Q9H344 312 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 SRMSQ9H3Y6 488 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 HEBP1Q9NRV9 189 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 SHPKQ9UHJ6 478 aa4.83□□□□□ -1.64
CHD1-208ENST00000512392 ROBO3Q96MS0 1386 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 IGKV1-8A0A0C4DH67 115 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 IGLV5-39A0A0G2JS06 123 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 TPST1O60507 370 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 DUS4LO95620 317 aaKnown RBP4.82□□□□□ -1.64
CHD1-208ENST00000512392 TRBV12-3P01733 135 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 METTL15P1P0C7V9 234 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 ZNF806P0C7X5 589 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 CTLA4P16410 223 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 VEGFCP49767 419 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 C1QTNF8P60827 252 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 RPS24P62847 133 aaKnown RBP4.82□□□□□ -1.64
CHD1-208ENST00000512392 COL10A1Q03692 680 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 SRSF4Q08170 494 aaKnown RBP4.82□□□□□ -1.64
CHD1-208ENST00000512392 IL15RAQ13261 267 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 HERPUD1Q15011 391 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 KCNJ8Q15842 424 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 FAM222AQ5U5X8 452 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 AGTRAPQ6RW13 159 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 CXCL17Q6UXB2 119 aa4.82□□□□□ -1.64
CHD1-208ENST00000512392 OR10G6Q8NH81 332 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms