RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 NKAIN3Q8N8D7 197 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 OR4K15Q8NH41 348 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 OR9G1Q8NH87 305 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 Q96M66 194 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 MMP28Q9H239 520 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 VCX3BQ9H321 246 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 NCOR1P1Q9H4R4 102 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 SERTAD4Q9NUC0 356 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 PITPNC1Q9UKF7 332 aa10.65□□□□□ -0.7
RNF4-215ENST00000511843 MEGF8Q7Z7M0 2845 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 UBE2QL1A1L167 161 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 C15orf65H3BRN8 121 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 J3QR06 171 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 AIPO00170 330 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 TIMM23O14925 209 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 SC5DO75845 299 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 ATP6V1G2O95670 118 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 MPIG6BO95866 241 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 MT-ND4P03905 459 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 GPR50Q13585 617 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 ARSJQ5FYB0 599 aaPredicted RBP10.64□□□□□ -0.71
RNF4-215ENST00000511843 SIGIRRQ6IA17 410 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 ZNF497Q6ZNH5 498 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 MS4A15Q8N5U1 240 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 THRSPQ92748 146 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 UFD1Q92890 307 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 TOMM40LQ969M1 308 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 LINC00574Q9H8X3 128 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 PCDHB16Q9NRJ7 776 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 RCC2Q9P258 522 aaKnown RBP10.64□□□□□ -0.71
RNF4-215ENST00000511843 PEX16Q9Y5Y5 336 aa10.64□□□□□ -0.71
RNF4-215ENST00000511843 MCRIP1C9JLW8 97 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 SDCBPO00560 298 aaPredicted RBP10.63□□□□□ -0.71
RNF4-215ENST00000511843 BRS3P32247 399 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 CEACAM3P40198 252 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 HERPUD1Q15011 391 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 HSD17B12Q53GQ0 312 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 TMEM91Q6ZNR0 172 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 Q6ZTK2 550 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 CDH26Q8IXH8 852 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 Q8N2B8 174 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 PRR18Q8N4B5 295 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 FAM110DQ8TAY7 271 aaPredicted RBP10.63□□□□□ -0.71
RNF4-215ENST00000511843 ARL11Q969Q4 196 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 RPEQ96AT9 228 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 RBMXL1Q96E39 390 aaKnown RBP10.63□□□□□ -0.71
RNF4-215ENST00000511843 GFI1Q99684 422 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 UQCC2Q9BRT2 126 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 SLC25A33Q9BSK2 321 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 PRSS22Q9GZN4 317 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 ETAA1Q9NY74 926 aa10.63□□□□□ -0.71
RNF4-215ENST00000511843 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 C12orf77C9JDV5 145 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 SLC31A2O15432 143 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 UCHL1P09936 223 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 VSIG8P0DPA2 414 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 CD28P10747 220 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 RCC1P18754 421 aaPredicted RBP10.62□□□□□ -0.71
RNF4-215ENST00000511843 SRMP19623 302 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 REG1BP48304 166 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 HSPA13P48723 471 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 TPBGQ13641 420 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 P2RY14Q15391 338 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 NKAPLQ5M9Q1 402 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 C1orf100Q5SVJ3 147 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 SYT6Q5T7P8 510 aaPredicted RBP10.62□□□□□ -0.71
RNF4-215ENST00000511843 PRSS48Q7RTY5 328 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 DRAM1Q8N682 238 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 OR56B4Q8NH76 319 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 OR1L1Q8NH94 360 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 CAPSLQ8WWF8 208 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 PHYHIPQ92561 330 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 MRPS24Q96EL2 167 aaKnown RBP10.62□□□□□ -0.71
RNF4-215ENST00000511843 NICN1Q9BSH3 213 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 SPACA1Q9HBV2 294 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 TRAPPC2LQ9UL33 140 aa10.62□□□□□ -0.71
RNF4-215ENST00000511843 AMMECR1Q9Y4X0 333 aaPredicted RBP10.62□□□□□ -0.71
RNF4-215ENST00000511843 SNRNP70P08621 437 aaKnown RBP10.61□□□□□ -0.71
RNF4-215ENST00000511843 CSF1P09603 554 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 CPEP16870 476 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 GZMHP20718 246 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 FUT3P21217 361 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 MNDAP41218 407 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 ARHGDIBP52566 201 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 LOXL3P58215 753 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 FABP5Q01469 135 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 MLLT11Q13015 90 aaPredicted RBP10.61□□□□□ -0.71
RNF4-215ENST00000511843 UNC119Q13432 240 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 MADCAM1Q13477 382 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 ABCA11PQ4W5N1 156 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 GLT8D1Q68CQ7 371 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 OR10A7Q8NGE5 316 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 OR10V1Q8NGI7 309 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 OR10X1Q8NGY0 326 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 CFHR4Q92496 578 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 CREB3L1Q96BA8 519 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 RBM14Q96PK6 669 aaKnown RBP10.61□□□□□ -0.71
RNF4-215ENST00000511843 MGLLQ99685 303 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 MMP27Q9H306 513 aa10.61□□□□□ -0.71
RNF4-215ENST00000511843 GFOD1Q9NXC2 390 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms