RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 TRAV18A0A075B6X5 111 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 CIB4A0PJX0 185 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 FAM74A7A6NL05 159 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 ORC5O43913 435 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 CDS2O95674 445 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 LEPP41159 167 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 SOX3P41225 446 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 OR1E2P47887 323 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 ADAM8P78325 824 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 MICAQ29983 383 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 FAM74A3Q4VXF1 159 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 PAMR1Q6UXH9 720 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 C8orf59Q8N0T1 100 aaPredicted RBP8.2□□□□□ -1.1
USP53-207ENST00000510852 ZNF614Q8N883 585 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 OR5M3Q8NGP4 307 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 GEMIN6Q8WXD5 167 aaKnown RBP8.2□□□□□ -1.1
USP53-207ENST00000510852 WFDC6Q9BQY6 131 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 MARVELD1Q9BSK0 173 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 NSG2Q9Y328 171 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 U3KQ87 197 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 A0A087WX48 190 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 J3QR06 171 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 CORTO00230 105 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 EI24O14681 340 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 SSR4P51571 173 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 RAB5BP61020 215 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 MRPL2Q5T653 305 aaKnown RBP8.2□□□□□ -1.1
USP53-207ENST00000510852 RTL6Q6ICC9 239 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 APOOLQ6UXV4 268 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 MBOAT2Q6ZWT7 520 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 KIR3DL3Q8N743 410 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 OR4C13Q8NGP0 309 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 OR5B3Q8NH48 314 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 APOBEC4Q8WW27 367 aaKnown RBP8.2□□□□□ -1.1
USP53-207ENST00000510852 CYGBQ8WWM9 190 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 HIST1H2BAQ96A08 127 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 APOBEC3DQ96AK3 386 aaPredicted RBP8.2□□□□□ -1.1
USP53-207ENST00000510852 UPRTQ96BW1 309 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 TAPBPLQ9BX59 468 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 PLSCR3Q9NRY6 295 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 TMEM38BQ9NVV0 291 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 PRO0628Q9UI54 55 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 TNFSF18Q9UNG2 199 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 DMXL2Q8TDJ6 3036 aa8.2□□□□□ -1.1
USP53-207ENST00000510852 A0A1B0GU03 582 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 NKX2-6A6NCS4 301 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 CCL24O00175 119 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 TFAP2AP05549 437 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
USP53-207ENST00000510852 CD96P40200 585 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 RPL31P62899 125 aaKnown RBP8.19□□□□□ -1.1
USP53-207ENST00000510852 MXD1Q05195 221 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 EDDM3AQ14507 147 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 DEFB109BQ30KR1 87 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 ZNF791Q3KP31 576 aaPredicted RBP8.19□□□□□ -1.1
USP53-207ENST00000510852 AVPI1Q5T686 147 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 OPN5Q6U736 354 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 ZFAND1Q8TCF1 268 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 CNBD2Q96M20 576 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 NODALQ96S42 347 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 C20orf144Q9BQM9 153 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 LOC400499M0QZD8 3231 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 APC2O95996 2303 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 MAP1LC3B2A6NCE7 125 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 WISP1O95388 367 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 FABP3P05413 133 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 ARSBP15848 533 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 HOXB6P17509 224 aaKnown RBP8.19□□□□□ -1.1
USP53-207ENST00000510852 SRYQ05066 204 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 NRF1Q16656 503 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 PYY3Q5JQD4 70 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 SPACA3Q8IXA5 215 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 IQCF1Q8N6M8 205 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 SLC30A7Q8NEW0 376 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 OR4M1Q8NGD0 313 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 MAP1LC3BQ9GZQ8 125 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 HSPB8Q9UJY1 196 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 RALYQ9UKM9 306 aaKnown RBP8.19□□□□□ -1.1
USP53-207ENST00000510852 RAB22AQ9UL26 194 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 NCOR2Q9Y618 2525 aa8.19□□□□□ -1.1
USP53-207ENST00000510852 ZAR1LA6NP61 321 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 PYCR1P32322 319 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 DLX6P56179 175 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 CD226Q15762 336 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 LDLRAD2Q5SZI1 272 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 FNDC7Q5VTL7 733 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 MARCH3Q86UD3 253 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 BEST3Q8N1M1 668 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 SSMEM1Q8WWF3 244 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 Q96MF0 132 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 RBP7Q96R05 134 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 MEGF9Q9H1U4 602 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 CACNA1AO00555 2505 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 A0A1W2PQD3 144 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 ANKRD20A5PA0PJZ0 165 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 FAM231BA6NCW3 169 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 OR5H1A6NKK0 313 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 ATP5LO75964 103 aa8.18□□□□□ -1.1
USP53-207ENST00000510852 IL6RP08887 468 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms